| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3592 |
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| Symbol | |
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| ID | 7388020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2987599 |
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| End bp | 2988603 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652418 |
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| Product | Cytochrome bd type quinol oxidase subunit 2 protein |
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| Protein accession | YP_002550600 |
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| Protein GI | 222149643 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.925835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTTG ATTATGCGTT CCTCTGGGCC GCGATCATCG CCTTTGCGGT GCTGGCCTAT
GTCATCCTTG ACGGCTTTGA TCTGGGCGTC GGCCTGCTGT TTCCGTTCTT CAAGAGCGAG
CATGACCGTG ACCAGATGAT GAATTCGGTG GCGCCCGTCT GGGATGGCAA CGAGACCTGG
CTGGTGCTGG GCGGCGGTGG TTTGATGGCG GTGTTTCCGC TGGCCTATGC CACCATCCTG
CCGGCGCTTT ACATGCCGAT CATTCTGATG CTGCTTGGTC TGATCTTTCG CGGCGTGGCC
TTCGAATACC GCTGGCGCAC ACGGCGCTGG AAGGGCGTTT GGGATGTCGG CTTTACCGGT
GGTTCGCTGG TGGCGGGCTT TTCGCAAGGC GTGGCGCTGG GCGCGTTGGT GCAGGGCATT
CCGGTCGTTG ACCGCGCCTA TGCTGGAGGC TGGTGGGACT GGCTGACACC GTTTTCGATT
GCAACAGGCG TCGCTCTTGT GTTCGGCTAC ACGCTGCTGG GCGCAACCTG GCTGGTGTTC
AAGACGGTTG GGCCGCTGCG CGCCCAGGCA CAACGCTACG CACTTGCTGC CGCCGTACTG
ACGGTTGGGG CGATGGGCGT GTTCAGCCTG TGGACGCCGT GGTTGAAGCC GCATTATCTC
GACCGCTGGT TTACCTTTCC GACAGCGGTG TTTTCCGTCA TCGTGCCAAT TCTGGTGCTC
GGCTGCCTCT ATCTGGTGTT CAAGGGCCTG CGCGACGGTA AGGACTGGCT GCCCTTCGTC
GCCTCGCTTG CGCTGTTCGT GCTTGGCTAT GTCGGCATCG GCATCAGCTT CTATCCCTAT
ATCGTACCCA CCTCGGTGAC GATCTGGGAA GCGGCGGCGC CAGACACCAG CCTGAAATTC
CTATTGGTCG GGGCGGCTAT CCTCGTGCCG ATCATTCTGA TTTATACGAC CTATGCCTAT
TGGGTGTTCC GAGGCAAGAT CGATCCGGAA GAAGGGTATC ATTGA
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| Protein sequence | MPFDYAFLWA AIIAFAVLAY VILDGFDLGV GLLFPFFKSE HDRDQMMNSV APVWDGNETW
LVLGGGGLMA VFPLAYATIL PALYMPIILM LLGLIFRGVA FEYRWRTRRW KGVWDVGFTG
GSLVAGFSQG VALGALVQGI PVVDRAYAGG WWDWLTPFSI ATGVALVFGY TLLGATWLVF
KTVGPLRAQA QRYALAAAVL TVGAMGVFSL WTPWLKPHYL DRWFTFPTAV FSVIVPILVL
GCLYLVFKGL RDGKDWLPFV ASLALFVLGY VGIGISFYPY IVPTSVTIWE AAAPDTSLKF
LLVGAAILVP IILIYTTYAY WVFRGKIDPE EGYH
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