Gene Avi_3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3583 
Symbol 
ID7388015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2980829 
End bp2981710 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID643652413 
Producttranscriptional regulator AraC family 
Protein accessionYP_002550595 
Protein GI222149638 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCA AGATCGACGG ACTGTCCGTC TCCTCCGGCC TGCACCGGCG CTATTGGAAC 
GGCATGGTCG CCGATCTCTG GTCGGTGGAT TGCCAAAGCG ACGCGGGTGG CCAGTATGTC
AGCAGCGATC CACGTCTGTT CATTCTTTTG GACGCCGCAG GCGAGGATGG GGCCGACCTC
AGCATGGCTG AAGGCGGTGG CAAGCGGATT TCCGGAGCGA TGGCCAGGGC AGCCCATTTC
ATTCCCGCCG GGTTGGAACT ATCGACTGCG ATCACCGGGG TGAAAAGCCT ACGGCATCTG
GACCTGCATT TCGATGCCGA TATCTTGCGG CACCGACTGG GCGAGGATGC CGGGCTGGCG
GCATTGCACC AGCCGCGCTA CCTTCTTGAT GATCCTCGAC TGCTGGCCCT GGCCGAACTG
ATCGCCGCCG ATGTCGCCAA TCCGCATCCC CTGCACGATC TCTATGGCGA TGGGCTGGTC
AGCGCGCTGC TGATCGACGT GCTGAACATT CGCCCCACCC CTACGCACCA ACTGCCCAAC
CGCAAACGCA GCAAGCTGGC CGCCTGGCAG CTCCGCCGGG TTTGCGATTT CATCGAGGCC
CATTGCCTGC GCACCATCCG GCTGGAGGAA TTGGCCGGGC TGGCAGGCCT GTCACCCACC
TATTTCAGCC ACGCCTTCAA GGCCTCGACG GGCCTGTCGC CGCATCAATG GCAGATGAAG
GCGCGGATCG AAACGGTCAA GCAGCGGCTG CGCGACCCCG CCGTACCGCT GACGGTAATT
GCCGCCGAAA CCGGCTTTGC CGACGCCGCC CATTTTGCCC GCAGCTTTCG CCGCGCCGTC
GGCCTGTCGC CGTCCGAGTG GCGGCGAGTC CGGCTCAATT GA
 
Protein sequence
MTSKIDGLSV SSGLHRRYWN GMVADLWSVD CQSDAGGQYV SSDPRLFILL DAAGEDGADL 
SMAEGGGKRI SGAMARAAHF IPAGLELSTA ITGVKSLRHL DLHFDADILR HRLGEDAGLA
ALHQPRYLLD DPRLLALAEL IAADVANPHP LHDLYGDGLV SALLIDVLNI RPTPTHQLPN
RKRSKLAAWQ LRRVCDFIEA HCLRTIRLEE LAGLAGLSPT YFSHAFKAST GLSPHQWQMK
ARIETVKQRL RDPAVPLTVI AAETGFADAA HFARSFRRAV GLSPSEWRRV RLN