| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3581 |
|---|
| Symbol | fhuC |
|---|
| ID | 7388014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2979821 |
|---|
| End bp | 2980636 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643652412 |
|---|
| Product | ABC transporter nucleotide binding/ATPase protein (ferrichrome) |
|---|
| Protein accession | YP_002550594 |
|---|
| Protein GI | 222149637 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCG AACATCGCAA AATCCTGGCC GCAGGCGAGC CGGAGATGAT TTTCGAAACG
CAGGCGCTTG GTTTCACCGT CGATGGCCGG GCCTTGTTGC GGGATGTGTC GATCGGTTTC
CGTAAGGGTG AGATTTCCGG TCTTGTCGGC CATAATGGTT CGGGCAAATC CACATTGCTG
AAGCTTCTCG CCCGCCAGCA AAGCCTGACA TCCGGGACGA TCCATTTTGC CGGGGCGGAT
GCCGGCGCGC TTGGCGCGCG CGATTTTGCC CGCAAGGTTG CCTATCTGCC ACAGGACGTG
ACGGCGGCCC ATGGCATGAC CGTGCGCGAA CTGGTGGCCT GCGGACGCTA TCCCTGGCAT
GGCGCGCTTG GCCGGTTTAC CGAGGCGGAC AAGGCCAAGG TGGAGGAGGC GCTGGACTTG
ACCCATGTCC TGCCGATGGC GGACCGCATG GTGGATACGT TGTCGGGCGG CGAGCGCCAG
CGGGCCTGGA TCGCCATGCT GGTGGCGCAG GACAGCGAAT GCCTGCTGCT GGATGAGCCG
ACCTCGGCGC TCGATATCGC CCATCAGATG GATGTGCTGG CGCTGGTGCG CCGCCTGTCG
CAGGAAAAGG GTCTGAGCGT CATCATCGTC CTGCATGACA TCAACATGGC CAGCCGTTTC
TGTGACCGGC TCTATGCGCT GAAGGCCGGG CAATTGATTG CCGAGGGCTC CCCCACGGCT
TTGATGACCC GCGAGACGCT GAACGCCATC TACGGCGTCG ATATGGACGT CACCCGCCAT
CCAGGTTTGG AGATCCCGCT CGCCTATGTC TGCTGA
|
|---|
| Protein sequence | MASEHRKILA AGEPEMIFET QALGFTVDGR ALLRDVSIGF RKGEISGLVG HNGSGKSTLL
KLLARQQSLT SGTIHFAGAD AGALGARDFA RKVAYLPQDV TAAHGMTVRE LVACGRYPWH
GALGRFTEAD KAKVEEALDL THVLPMADRM VDTLSGGERQ RAWIAMLVAQ DSECLLLDEP
TSALDIAHQM DVLALVRRLS QEKGLSVIIV LHDINMASRF CDRLYALKAG QLIAEGSPTA
LMTRETLNAI YGVDMDVTRH PGLEIPLAYV C
|
|---|
| |