Gene Avi_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3577 
SymbolfhuA 
ID7387163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2974161 
End bp2976317 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content59% 
IMG OID643652408 
Producthydroxamate-type ferrisiderophore receptor 
Protein accessionYP_002550590 
Protein GI222149633 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.601026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAA TGACGAAGGG GGCCGGTGGA CGCGCGCAGC CTGCGGACCG GATGATGTCC 
AGACATGGAC AATTGCTGCT GGGCAGTATT GCCGGTCTGG CGCTGATTGC CGCCGCCTCG
CAAGCCTGGT CGCAAGAGAA GGAAACGGAA CTCTCGACCA TTACCGTTCA GGGCAAATCC
TCGGCCACAG GCCCGGATGC CAATATCGTC GCCAAGGAGA CGACTGTCGG CAGCAAGACC
GATACACCGA TCATCGACAT TCCCCAGGCC GTCTCCGTTG TCACCCTGAA GGAAATGGAA
ACGCGCGGCG TCAGTGACAT GCAGGCTGCC GTTGCCTATA CGTCCGGTGT GGTTGTCGAT
GAATTCGGCT CCGACGATCG CTACGACTAT TACCGTATTC GCGGCTTCGA CACGACCACG
CTCGGCATCT ATCGCGATGG CCTGAGTGCG CGCATTCCCG CCTGGTTTAC CGCAGCGCGC
ACCGAACCCT ACGGCCTGGA ACGCGTGGAA GTGCTGAAAG GCTCGACCTC CACTCTGTTC
GGCCTCAACG GTCCGGGCGG GATGATCAAT GCCGTCACCA AGCATCCGAC CGACACGTTC
CATGCCGAGG TCTATACCAC CTTCGGCGAC AACCATATCG AAACCGGCAC GGATTTCGGC
GGCCCGATCG ACAAGGACGG GGTCTTCACC TACCGGATTA CCGCCAAATG GCAGAACGCC
GACCTGGGCT CGGATTATTC CAACGACGAC CGGATCTACA TCGCTCCGGC CCTGACCATC
AGCCCGGACG AGAGCACCTC GCTGACCTTC CTGACCGACT ACAACAAGCG CGACACCACG
CCGGCCCTGG GCTTCCCAGC CGGTCTCGAC GTCGATACAA CCCGGTTCTA CGGCGAGCCG
GACTTCAACA AGTTCGACAC GATCCAGAAG GATGTCGGCT ACGAGTTCCG CCACGAGATC
ACCGAGGGTC TGACCTTCCG GCAGAATGCC CGCTACTCGC ATGTGGACCT GGATTATGAG
ACAGTCTATG GCGCCAGCAC AGATTCGAGC GTCAATCGGG AAGCCTATGC CGTGGACGGC
GTGGCGGATC GCTTCGCCAT CGACAATCAA CTGGAATATG ACACCAGCAC GGCTCGCCTC
GACAGCAAGA CTTTGCTGGG TGTTGACTAT GCCTATGACA GCACCCATGA AGTCATTGGC
TATGGCTCGG CCCCGGGCAT CGACATCAAC AATCCGGTGT ATTGCGGTCG CTCCTGCGTG
TCTCTCGATC CCTATCTCGA TTGGAAGGTC AAGCAGAAGG CACTCGGCGT CTACGCCCAG
GAACAGCTGA CGCTGGATGA CCGCTGGATT CTGACGCTGG GCGGGCGCTA TGATTACGTC
AATACCGAAG CCGACTATCT CTATACCGGC ACGAGCGACA ATAACACGTC GGAAGCCTTC
ACCAAGCGGA TCGGCTTGAG CTACAAGATC ACACCGGAAC TTGCTGCCTA TGCCAATTAT
TCCACGTCCT TCCAGCCGCT GGTGACCCCG ACCGCCAATG GCTATTCCGT TGAAGGCTCC
TTGAAGCCGC AGGAAGGCGA ACAGTATGAA ATCGGCTTGA AATACAAGCC CGACAGTTTC
GACGCCATGT TCACGGTCGC CCTGTTCGAC ATAACCCAAA CCAATGTTCC CTCCAACGTC
ACCCCCATAC TACAGCGCCA GATCGGCAAG GTCGGGGTGC GCGGCGTGGA AGTGGAGGGC
AAGGTGGCGC TCAACGACCG CTGGAACATG ACGCTTGCCT ATTCCTATTG GGATGCAGAG
ATCAAGGAAG ACGGTACCGG CGGCGATGCC GGCAACCGAC CCGAGCGCGT TCCGAGAAAC
ACCGCCTCGG CCTGGGTCGA TTATACCATT CCCGGCAATG GCTGGCGCGG CGACCTGACG
CTGGGCGGCG GTGTCCGTTA TGTCGGCTCC AGCTACGGCG ATTCGGCCAA TACCGTGAAG
GTCGATGCCT ATACCGTGGT CGATGCCATG GCGAGCTACA AGGTGACCGA AAACGTCACC
TTCGCGATCA ATGCCAAGAA CCTGTTCGAC AAGAAATACG TCACCACCAC CTATTACGGC
AGCTCCTACT ACGGCGACCG CCGCACGGTT TTGGGGACAC TGAAATATAC CTGGTAA
 
Protein sequence
MTKMTKGAGG RAQPADRMMS RHGQLLLGSI AGLALIAAAS QAWSQEKETE LSTITVQGKS 
SATGPDANIV AKETTVGSKT DTPIIDIPQA VSVVTLKEME TRGVSDMQAA VAYTSGVVVD
EFGSDDRYDY YRIRGFDTTT LGIYRDGLSA RIPAWFTAAR TEPYGLERVE VLKGSTSTLF
GLNGPGGMIN AVTKHPTDTF HAEVYTTFGD NHIETGTDFG GPIDKDGVFT YRITAKWQNA
DLGSDYSNDD RIYIAPALTI SPDESTSLTF LTDYNKRDTT PALGFPAGLD VDTTRFYGEP
DFNKFDTIQK DVGYEFRHEI TEGLTFRQNA RYSHVDLDYE TVYGASTDSS VNREAYAVDG
VADRFAIDNQ LEYDTSTARL DSKTLLGVDY AYDSTHEVIG YGSAPGIDIN NPVYCGRSCV
SLDPYLDWKV KQKALGVYAQ EQLTLDDRWI LTLGGRYDYV NTEADYLYTG TSDNNTSEAF
TKRIGLSYKI TPELAAYANY STSFQPLVTP TANGYSVEGS LKPQEGEQYE IGLKYKPDSF
DAMFTVALFD ITQTNVPSNV TPILQRQIGK VGVRGVEVEG KVALNDRWNM TLAYSYWDAE
IKEDGTGGDA GNRPERVPRN TASAWVDYTI PGNGWRGDLT LGGGVRYVGS SYGDSANTVK
VDAYTVVDAM ASYKVTENVT FAINAKNLFD KKYVTTTYYG SSYYGDRRTV LGTLKYTW