Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3577 |
Symbol | fhuA |
ID | 7387163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2974161 |
End bp | 2976317 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652408 |
Product | hydroxamate-type ferrisiderophore receptor |
Protein accession | YP_002550590 |
Protein GI | 222149633 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.601026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAA TGACGAAGGG GGCCGGTGGA CGCGCGCAGC CTGCGGACCG GATGATGTCC AGACATGGAC AATTGCTGCT GGGCAGTATT GCCGGTCTGG CGCTGATTGC CGCCGCCTCG CAAGCCTGGT CGCAAGAGAA GGAAACGGAA CTCTCGACCA TTACCGTTCA GGGCAAATCC TCGGCCACAG GCCCGGATGC CAATATCGTC GCCAAGGAGA CGACTGTCGG CAGCAAGACC GATACACCGA TCATCGACAT TCCCCAGGCC GTCTCCGTTG TCACCCTGAA GGAAATGGAA ACGCGCGGCG TCAGTGACAT GCAGGCTGCC GTTGCCTATA CGTCCGGTGT GGTTGTCGAT GAATTCGGCT CCGACGATCG CTACGACTAT TACCGTATTC GCGGCTTCGA CACGACCACG CTCGGCATCT ATCGCGATGG CCTGAGTGCG CGCATTCCCG CCTGGTTTAC CGCAGCGCGC ACCGAACCCT ACGGCCTGGA ACGCGTGGAA GTGCTGAAAG GCTCGACCTC CACTCTGTTC GGCCTCAACG GTCCGGGCGG GATGATCAAT GCCGTCACCA AGCATCCGAC CGACACGTTC CATGCCGAGG TCTATACCAC CTTCGGCGAC AACCATATCG AAACCGGCAC GGATTTCGGC GGCCCGATCG ACAAGGACGG GGTCTTCACC TACCGGATTA CCGCCAAATG GCAGAACGCC GACCTGGGCT CGGATTATTC CAACGACGAC CGGATCTACA TCGCTCCGGC CCTGACCATC AGCCCGGACG AGAGCACCTC GCTGACCTTC CTGACCGACT ACAACAAGCG CGACACCACG CCGGCCCTGG GCTTCCCAGC CGGTCTCGAC GTCGATACAA CCCGGTTCTA CGGCGAGCCG GACTTCAACA AGTTCGACAC GATCCAGAAG GATGTCGGCT ACGAGTTCCG CCACGAGATC ACCGAGGGTC TGACCTTCCG GCAGAATGCC CGCTACTCGC ATGTGGACCT GGATTATGAG ACAGTCTATG GCGCCAGCAC AGATTCGAGC GTCAATCGGG AAGCCTATGC CGTGGACGGC GTGGCGGATC GCTTCGCCAT CGACAATCAA CTGGAATATG ACACCAGCAC GGCTCGCCTC GACAGCAAGA CTTTGCTGGG TGTTGACTAT GCCTATGACA GCACCCATGA AGTCATTGGC TATGGCTCGG CCCCGGGCAT CGACATCAAC AATCCGGTGT ATTGCGGTCG CTCCTGCGTG TCTCTCGATC CCTATCTCGA TTGGAAGGTC AAGCAGAAGG CACTCGGCGT CTACGCCCAG GAACAGCTGA CGCTGGATGA CCGCTGGATT CTGACGCTGG GCGGGCGCTA TGATTACGTC AATACCGAAG CCGACTATCT CTATACCGGC ACGAGCGACA ATAACACGTC GGAAGCCTTC ACCAAGCGGA TCGGCTTGAG CTACAAGATC ACACCGGAAC TTGCTGCCTA TGCCAATTAT TCCACGTCCT TCCAGCCGCT GGTGACCCCG ACCGCCAATG GCTATTCCGT TGAAGGCTCC TTGAAGCCGC AGGAAGGCGA ACAGTATGAA ATCGGCTTGA AATACAAGCC CGACAGTTTC GACGCCATGT TCACGGTCGC CCTGTTCGAC ATAACCCAAA CCAATGTTCC CTCCAACGTC ACCCCCATAC TACAGCGCCA GATCGGCAAG GTCGGGGTGC GCGGCGTGGA AGTGGAGGGC AAGGTGGCGC TCAACGACCG CTGGAACATG ACGCTTGCCT ATTCCTATTG GGATGCAGAG ATCAAGGAAG ACGGTACCGG CGGCGATGCC GGCAACCGAC CCGAGCGCGT TCCGAGAAAC ACCGCCTCGG CCTGGGTCGA TTATACCATT CCCGGCAATG GCTGGCGCGG CGACCTGACG CTGGGCGGCG GTGTCCGTTA TGTCGGCTCC AGCTACGGCG ATTCGGCCAA TACCGTGAAG GTCGATGCCT ATACCGTGGT CGATGCCATG GCGAGCTACA AGGTGACCGA AAACGTCACC TTCGCGATCA ATGCCAAGAA CCTGTTCGAC AAGAAATACG TCACCACCAC CTATTACGGC AGCTCCTACT ACGGCGACCG CCGCACGGTT TTGGGGACAC TGAAATATAC CTGGTAA
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Protein sequence | MTKMTKGAGG RAQPADRMMS RHGQLLLGSI AGLALIAAAS QAWSQEKETE LSTITVQGKS SATGPDANIV AKETTVGSKT DTPIIDIPQA VSVVTLKEME TRGVSDMQAA VAYTSGVVVD EFGSDDRYDY YRIRGFDTTT LGIYRDGLSA RIPAWFTAAR TEPYGLERVE VLKGSTSTLF GLNGPGGMIN AVTKHPTDTF HAEVYTTFGD NHIETGTDFG GPIDKDGVFT YRITAKWQNA DLGSDYSNDD RIYIAPALTI SPDESTSLTF LTDYNKRDTT PALGFPAGLD VDTTRFYGEP DFNKFDTIQK DVGYEFRHEI TEGLTFRQNA RYSHVDLDYE TVYGASTDSS VNREAYAVDG VADRFAIDNQ LEYDTSTARL DSKTLLGVDY AYDSTHEVIG YGSAPGIDIN NPVYCGRSCV SLDPYLDWKV KQKALGVYAQ EQLTLDDRWI LTLGGRYDYV NTEADYLYTG TSDNNTSEAF TKRIGLSYKI TPELAAYANY STSFQPLVTP TANGYSVEGS LKPQEGEQYE IGLKYKPDSF DAMFTVALFD ITQTNVPSNV TPILQRQIGK VGVRGVEVEG KVALNDRWNM TLAYSYWDAE IKEDGTGGDA GNRPERVPRN TASAWVDYTI PGNGWRGDLT LGGGVRYVGS SYGDSANTVK VDAYTVVDAM ASYKVTENVT FAINAKNLFD KKYVTTTYYG SSYYGDRRTV LGTLKYTW
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