| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3571 |
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| Symbol | |
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| ID | 7388834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2967357 |
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| End bp | 2968133 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652402 |
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| Product | sorbitol dehydrogenase |
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| Protein accession | YP_002550585 |
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| Protein GI | 222149628 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGCA GATTAGACGG AAAATCCGCC CTGATTACCG GCTCCGCCCG TGGCATTGGC
CGTGCGTTTG CAGAGGCCTA TGTGCGTGAA GGTGCCACGG TTGCCATTGC CGATATCAAT
ATGGAACGGG CATTGGAAAC CGCCAAAGCC ATTGGCGAGA AAGCCTATGC CGTTCATCTG
GATGTCACCA ATCAGGCTTC CATTGATGCC GCCATCAAGG CGGTGGAAGA GAAAACTGGC
GGCCTTGATA TCCTCATCAA CAATGCCGCC CTGTTTGATC TTGCGCCTAT CGTGGACATC
ACCCGCGAGA GCTATGATCG GCTGTTTTCC ATCAATGTCG CTGGCTCACT CTTCATGCTG
CAAGCGACGG CGAAATCGAT GATTGCCCGT GGCAAGGGCG GCAAGATTAT CAATATGGCA
AGCCAGGCTG GACGGCGCGG TGAAGCGCTG GTGGCGGTCT ATTGCGCCAC CAAGGCGGCG
ATTATCTCAA TCACCCAATC GGCAGGGCTG GACCTGATCA AGCATGGCAT CAATGTCAAC
GCCATTGCCC CCGGCGTGGT CGATGGCGAG CATTGGGATG GTGTGGATGC GCTGTTTGCC
AAGTTTGAAA ACCGCGCCCC CGGCGAGAAG AAAAAGCTAG TGGGTGAGGC TGTTCCGTTT
GGCCGCATGG GGACGGCGCA CGATCTCACG GGCATGGCGA TTTTTCTGGC CTCAAGCGAG
GCCGATTATG TGGTGGCCCA GACGTATAAC GTCGATGGCG GCAATTGGAT GAGTTGA
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| Protein sequence | MTGRLDGKSA LITGSARGIG RAFAEAYVRE GATVAIADIN MERALETAKA IGEKAYAVHL
DVTNQASIDA AIKAVEEKTG GLDILINNAA LFDLAPIVDI TRESYDRLFS INVAGSLFML
QATAKSMIAR GKGGKIINMA SQAGRRGEAL VAVYCATKAA IISITQSAGL DLIKHGINVN
AIAPGVVDGE HWDGVDALFA KFENRAPGEK KKLVGEAVPF GRMGTAHDLT GMAIFLASSE
ADYVVAQTYN VDGGNWMS
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