| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3570 |
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| Symbol | |
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| ID | 7388833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2966362 |
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| End bp | 2967360 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652401 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sorbitol/mannitol) |
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| Protein accession | YP_002550584 |
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| Protein GI | 222149627 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAGTA TTCAGCTTAA AAACGTCTCG AAAGCCTTTG CCGAACACAA GGTTATTCCC
GGCATTGATC TGGAGATCAA CAATGGCGAA TTCGTCGTCT TCGTTGGCCC CTCCGGCTGT
GGCAAATCCA CCCTGCTGCG GCTGATTGCC GGGCTGGAAG ATACAAGCGG CGGCAAGATT
TTCATTGACG GCACGGATGC CACAGACCGC AAACCGTCTG AGCGCGGCCT TGCCATGGTG
TTTCAATCCT ATGCGCTTTA CCCGCATATG AGCGTGCGCT CCAACATTGG CTTTCCGCTA
AAAATGGCGG GCATGGACAA GGGCGAGATT GACAAAAAGG TCACGGATGC CGCCCGCATC
CTCAACCTCA CGGATTATCT CGACCGCAAG CCGCGCCAGC TCTCGGGCGG TCAGCGCCAG
CGTGTAGCCA TTGGCCGCGC CATTGTGCGC TCACCCTCGT GCTTTTTGTT TGATGAGCCG
CTCTCCAATC TGGATGCGGC GTTGCGCGTC AACATGCGGC TGGAAATCAC CGAGTTGCAC
CAGAAGCTGG GCGCGACATC GATTTACGTC ACCCACGATC AGGTGGAAGC CATGACCATG
GCCGACAAGA TTGTGGTGCT GAACAAGGGC CGGATTGAGC AGGTTGGCTC GCCAATGGAG
CTGTATCACA AGCCCGCCAA TTTGTTTGTC GCAGGCTTTA TCGGCTCGCC GAAGATGAAC
CTGATTTCTG GCGAAACCGC CCAAAAATAT GGAGCGACCA CCATCGGCGT GCGCCCGGAA
CATGTGACGC TCTCCACCAC CGACGGCGCG TGGAAAGGCA AGGTGACGAT TGCCGAACAT
CTCGGCTCTG ACACCCATTT GCATGTCGAT GTTGAAGGTC TTGGCCATCT CACCGCCCGC
GCGGATGGCG ATTTCACCGC CCGCCATGGC GACACGGTGT TCATTACCCC GGATGACACG
CGCATTCATC GTTTTAACGA ACAGGGATTA GCAGCATGA
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| Protein sequence | MGSIQLKNVS KAFAEHKVIP GIDLEINNGE FVVFVGPSGC GKSTLLRLIA GLEDTSGGKI
FIDGTDATDR KPSERGLAMV FQSYALYPHM SVRSNIGFPL KMAGMDKGEI DKKVTDAARI
LNLTDYLDRK PRQLSGGQRQ RVAIGRAIVR SPSCFLFDEP LSNLDAALRV NMRLEITELH
QKLGATSIYV THDQVEAMTM ADKIVVLNKG RIEQVGSPME LYHKPANLFV AGFIGSPKMN
LISGETAQKY GATTIGVRPE HVTLSTTDGA WKGKVTIAEH LGSDTHLHVD VEGLGHLTAR
ADGDFTARHG DTVFITPDDT RIHRFNEQGL AA
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