| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3569 |
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| Symbol | |
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| ID | 7388832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2965519 |
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| End bp | 2966349 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652400 |
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| Product | ABC transporter membrane spanning protein (sorbitol/mannitol) |
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| Protein accession | YP_002550583 |
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| Protein GI | 222149626 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.550263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCG CAATATCCAC CAAGCGTAAG CTGACCTTTA CCCTCATGGC ATGGGCAATT
GGCCTGTTAC TGTTCTTCCC GATTCTGTGG ACCTTCCTCA CCAGTTTCAA AAGCGAGGGC
GATGCTATCG CCTCGCCTCC GGTGTTTTTG TTCTTCCACT GGACCACGGA AAATTATGTC
GAGGTGCAGG GCCGCTCGGA TTATTTTGCC CACTTCATGA ACTCGGTGAT CATCTCCTTT
GGCTCCACGC TTCTAGGGCT GGCCATTGCC ATTCCGTCCG CATGGGCCAT GGCCTTTTCG
CCCACCAAGC GCACCAAGGA TGTGCTGATG TGGATGCTTT CCACCAAGAT GATGCCGCCC
GTGGGCGCAC TGATCCCGAT CTATCTGCTG TTTCGCGATG GCGGATTGCT CGATAGCCGC
ATCGGTCTGG TCGGCGTGCT GACCATGATC AACCTGCCGA TTATCATCTG GATGCTCTAC
ACTTACTTTA AGGAAATTCC GGGCGAAATT CTGGAAGCCG CCCGCATGGA TGGCGCATCC
CTGATCAAGG AAATCATCTA TGTGCTGACG CCCATGGCGG TTCCGGGCAT TGCCTCGACC
ATGCTGTTGA ACATCATTCT GTCGTGGAAC GAGGCGTTTT GGACCCTCAA CCTCACCACC
TCCGTGGCGG CACCGCTCAC CACCTTCATC GCCTCCTATT CCAGCCCCGA AGGCCTGTTT
TACGCCAAGC TCTCGGCTGC CTCCACCATG GCGATTGCTC CAATCGTTGT GCTCGGATGG
TTCAGCCAGA AACAGCTGGT GCGCGGACTG ACTTTTGGCG CGGTTAAATA A
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| Protein sequence | MARAISTKRK LTFTLMAWAI GLLLFFPILW TFLTSFKSEG DAIASPPVFL FFHWTTENYV
EVQGRSDYFA HFMNSVIISF GSTLLGLAIA IPSAWAMAFS PTKRTKDVLM WMLSTKMMPP
VGALIPIYLL FRDGGLLDSR IGLVGVLTMI NLPIIIWMLY TYFKEIPGEI LEAARMDGAS
LIKEIIYVLT PMAVPGIAST MLLNIILSWN EAFWTLNLTT SVAAPLTTFI ASYSSPEGLF
YAKLSAASTM AIAPIVVLGW FSQKQLVRGL TFGAVK
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