| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3567 |
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| Symbol | |
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| ID | 7388830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2963028 |
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| End bp | 2964347 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652398 |
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| Product | ABC transporter substrate binding protein (sorbitol) |
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| Protein accession | YP_002550581 |
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| Protein GI | 222149624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGA AAACACTATT GCTGGGCGCC TGCTCAGTCT TGGCCATGGC TGGCGTGACC
TCTGCCGAAA CGCTGACGAT TGCTACCGTC AACAACGGCG ACATGATCCG TATGCAAAAG
CTGACGGATG ATTTTACCAA GAAAAATCCC GGCATTGATG TGAAGTGGGT GACGCTGGAA
GAAAACGTGC TGCGCCAGAA GGTGACCACC GATGTGGCCA CCAAAGGCGG CCAGTATGAC
GTAATGACCA TTGGCATCTA TGAAGCGCCG ATCTGGGGCA AGCAGGGCTG GCTGGCACCG
CTGGACAAGC TGAGTGCCGA TAAGGATTAC GACGCAGCCG ACCTTCTGCC GCCGGTGCGC
TCTGGCCTGA CCGTCGATGG CAAGCTTTAT GCGGCACCGT TTTATGCCGA AAGCTCGATG
GTGATGTATC GCAAGGATCT GTTTGAAAAA GCGGGCCTGA AAATGCCGGA AGCCCCCACC
TGGGACTTCA TCAAGGAAGC CGCCGACAAG ATTACCGATA AATCCAAGGA AGTGTACGGC
ATCTGCCTGC GCGGCAAGGC TGGCTGGGGT GAAAACATCG CTTTCCTCTC CGCCATGTCC
AATTCCTTTG GTGCGCGCTG GTTTGATGAA CAGTGGAAGC CACAGTTTGA TCAGCCGGAG
TGGAAAAAGA CCCTTCAGTT CTATGTGGAC CTGATGAAGA AGAACGGCCC TCCCGGTGCG
TCTTCCAATG GCTTTAATGA AAACCTCGCC CTGTTCCAGA CCGGCAAATG CGGCATGTGG
ATTGATGCCA CCGTGGCAGC ATCCTTCGTG ACCAACCCGA AGGAATCCAA GGTTGCTGAT
CAGGTCGGCT TTGCTTTGGC TCCCGATAAT GGTCTTGGCA AGCGCGGCAA CTGGCTGTGG
TCCTGGAACC TCGCCATTCC TGCTGGCTCC AAGAAGGTCG AAGCCGCTGA AAAGTTCATC
GCCTGGGCAA CCAGTAAGGA CTATCTGAAG CTGGTGGCCG AAAAGGACGG CTGGGCCAAT
GTTCCTCCGG GCACGCGCAC TTCGCTCTAT GCCAATGCCG ATTATCAGAA GGCAGCACCT
TTTGCCAAAA TGACGCTGGA CAGCATCAAC TCGGCAGACC CCAAGCACCC CACCGTCAAG
CCCGTGCCTT ATGAGGGCGT GCAATATGTG GCCATTCCGG AGTTTCAGGG CATCGGCACC
GCCGTTGGCC AGCAATTCTC GGCAGCACTG GCCGGTCAGA CCACGGTGGA TCAGGCGTTG
AAGACGGCGC AGACGTTGAC TGAGCGTGAG ATGAAGAAGG CGGGTTATCC GAAGAAGTAA
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| Protein sequence | MTLKTLLLGA CSVLAMAGVT SAETLTIATV NNGDMIRMQK LTDDFTKKNP GIDVKWVTLE
ENVLRQKVTT DVATKGGQYD VMTIGIYEAP IWGKQGWLAP LDKLSADKDY DAADLLPPVR
SGLTVDGKLY AAPFYAESSM VMYRKDLFEK AGLKMPEAPT WDFIKEAADK ITDKSKEVYG
ICLRGKAGWG ENIAFLSAMS NSFGARWFDE QWKPQFDQPE WKKTLQFYVD LMKKNGPPGA
SSNGFNENLA LFQTGKCGMW IDATVAASFV TNPKESKVAD QVGFALAPDN GLGKRGNWLW
SWNLAIPAGS KKVEAAEKFI AWATSKDYLK LVAEKDGWAN VPPGTRTSLY ANADYQKAAP
FAKMTLDSIN SADPKHPTVK PVPYEGVQYV AIPEFQGIGT AVGQQFSAAL AGQTTVDQAL
KTAQTLTERE MKKAGYPKK
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