| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3551 |
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| Symbol | |
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| ID | 7388815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2945709 |
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| End bp | 2946683 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652383 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002550566 |
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| Protein GI | 222149609 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.375079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAGGA TGCTCCTTCC TCCTCATCCT ATTTTCTTGT TTGCGTTTGT CTTGGGGAAA
AGTGGAAACC GGTTTTCCCT AAGACAAACT CTAGGCCCTT CAACGACAGG CCCCGGAATG
ACCCCGACTG AACCACTGCA AAAGCCGCGC ACTGAAAACC GCCAGCGCGC CCTCGTCATG
CTAACAGGCG TGTCCAAAGT GTTTTCCAGC GGCACGGTGG CGCTGTCCAA CATGTCACTC
ACCGTCGAGG CGGGTGAATT CGTCAGCCTG CTCGGTCCCT CCGGCTGCGG CAAATCGACA
GCGCTTCGGA TCATTGCCGG TCTCGGTGGC ATCTCCAGCG GCACGGTCGA TTGGCCCAGT
TCCCGCATCA ATGCCAAGGG GCTGCCGGAA GGCGATATCA GCTTTGTTTT CCAGGAGCCG
ACCCTGCTGC CCTGGCAGAC CGTGTTCGGC AATGTCTATC TGCCGCTGCG TCTGCAAGGG
ATTTCCAAGG CAGCAGCAAC CTCGACTGTT CTCGAAACCC TTGACAGCGT GGGCCTGAAG
GATTTCGCGC AGGCCTATCC GCGCCAGCTT TCCGGCGGCA TGAAAATGCG GGTGTCGATT
GCCCGGGCGC TAGCGACCAA GCCGAAATTG CTGCTGATGG ACGAGCCGTT TGCAGCCCTT
GATGAAATCA CCCGGCAAAA GCTGAACGAC GACGTGCTGC GGCTGTGGCG CGAGACCGGC
ATTACCGTGA TCTTCGTGAC CCATTCAGTG TTCGAGGCCG CCTATCTCTC CAATCGCATC
GTGGTGATGA AGGCAAGGCC TGGCCGGGTG CATGCGGATT TCACCATTGC CACCAGCCTG
GAACGCGACG CCCATTACCG CACCTCGGAA GAATACCGGC AGGTCTGCGA AAAGGCTTCG
AATGTCCTGC TGGAAGCCAT CGGCTTTCCT CTTGATGGCG GCCTCTCCAT GGCGGGATTG
GAGCATCACG GATGA
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| Protein sequence | MMRMLLPPHP IFLFAFVLGK SGNRFSLRQT LGPSTTGPGM TPTEPLQKPR TENRQRALVM
LTGVSKVFSS GTVALSNMSL TVEAGEFVSL LGPSGCGKST ALRIIAGLGG ISSGTVDWPS
SRINAKGLPE GDISFVFQEP TLLPWQTVFG NVYLPLRLQG ISKAAATSTV LETLDSVGLK
DFAQAYPRQL SGGMKMRVSI ARALATKPKL LLMDEPFAAL DEITRQKLND DVLRLWRETG
ITVIFVTHSV FEAAYLSNRI VVMKARPGRV HADFTIATSL ERDAHYRTSE EYRQVCEKAS
NVLLEAIGFP LDGGLSMAGL EHHG
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