| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3549 |
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| Symbol | |
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| ID | 7388814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2944489 |
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| End bp | 2945508 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652382 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_002550565 |
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| Protein GI | 222149608 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAA CCATACTGCA CAAGACGATT GTCAACACTT TGGCCGCAAC CGCCCTGGCC
CTTGGCCTTG GCAGCCCGGC CATGGCGCTG GATGAGGTCA GCTACGGCAC CAACTGGCTG
GCCCAGGCCG AGCATGGCGG CTTTTACCAG GCCGTGGCCG ATGGCACCTA TGAAAAATAC
GGTTTGAAGG TGAAGATCGT CCAGGGCGGC CCCAATGCCG CCAATCAGGC ACTGCTGATC
GCCGGCAAGG TCGATTTCTA CATGGGCTTC CCGCTTCAGG AAATGGACGC TGTCAAGCAG
GGCATTCCGC TGATCGACGT GGCAGCCCTG TTCCAGAAGG ACCCACAGGT GCTGATCGCC
CATCCAGACC AGGGGATCGA AAAATTCGAG GATCTCGCCA AGCTCGACAC GATCTTCATG
GGCAAGGACG GCTATGCCAC CTATTTCGAG TGGATGAAGA AGAATTTCAA GGGCTTCAAG
GACGAGCAAT ACAAGCCCTA TACCTTCAAC CCGGCGCCCT TCCTCGCCAA CAAGAAATCC
GCCCAGCAGG GCTATATCAC TTCGGAGCCC TACGAGATCG AACAGCAGGG CGGCTTCAAG
CCGAAACTCT TCCTGCTGGC CGATAACGGC TACAGTTCCT ATGCGACGAT GATCACCACC
ACCCAGTCCA TGGTCGACAA GAAGCCGGAT GTGGTGCAGC GCTTCGTCGA TGCCTCGATC
GAGGGATGGT ACAAGTATCT CTACGGCGAC AACAAGGCCG CCAATGCGCT GATCAAAAAA
GACAATCCGG AAATCACCGA CGCTCAGATT GCCTTCTCCA TCGACAAGAT GAAGGAATAC
GGCATCGTCG AATCCGGCCC GACCCTGGAC AAGGGCATCG GCTGCATGAC CGACGAGCGC
TATAAGGCCT TCTTCGATAC CCTGGTCCAG ATCGGCGTCG TCGATGCCAA GCTCGACTAT
CACAAGGCCT ATACGACGAA ATTCGTCTGC AAGGGCGTCG GCCTGACCCT GAAGAAGTGA
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| Protein sequence | MTKTILHKTI VNTLAATALA LGLGSPAMAL DEVSYGTNWL AQAEHGGFYQ AVADGTYEKY
GLKVKIVQGG PNAANQALLI AGKVDFYMGF PLQEMDAVKQ GIPLIDVAAL FQKDPQVLIA
HPDQGIEKFE DLAKLDTIFM GKDGYATYFE WMKKNFKGFK DEQYKPYTFN PAPFLANKKS
AQQGYITSEP YEIEQQGGFK PKLFLLADNG YSSYATMITT TQSMVDKKPD VVQRFVDASI
EGWYKYLYGD NKAANALIKK DNPEITDAQI AFSIDKMKEY GIVESGPTLD KGIGCMTDER
YKAFFDTLVQ IGVVDAKLDY HKAYTTKFVC KGVGLTLKK
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