Gene Avi_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3530 
Symbol 
ID7388797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2926314 
End bp2926901 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content60% 
IMG OID643652365 
Producthypothetical protein 
Protein accessionYP_002550548 
Protein GI222149591 
COG category[S] Function unknown 
COG ID[COG5400] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTTT CCATCATTCG GGACCTGTTC AGGACCTGGA TTGTAACGGC TGGCGTGGTT 
GCGGCAAGTG TTGTTTCGCA GCCCGCGACT GCAATGGCGC AGGGCGATCA ATATACCATG 
CAGGAAGTGG TCGATGCCGG CCACTCCTTC TTCGGCTCGA CCAGCGGCGC GCTGGCCAAG 
GTGATCGAGA AGGCGTTCGG GCAATATGGC CTACCCAATG GCTATATTCT TGGCCAGGAA 
GGCTCCGGCG CGTTTATTGC TGGCCTCACC TATGGCGAAG GCACGCTCTA TACCAAGAAT 
GCCGGTCAGC ACCCCGTCTT CTGGCAGGGG CCGTCGCTCG GCATCGATTA CGGTGGCAAC 
GGCAGCCGCA CGATGATGCT GGTTTATAAC CTGCCCGCCG TCGGCAGCCT CTACAGCCGG 
TTTGGCGGTG TCAGCGGCTC GGCCTATGTG GTGGCCGGCG TCGGCATGAC GGCGCTGAAG 
AACAACAATA TGGTTCTGGT CCCGATCCGC ACCGGCGTCG GGGCAAGGCT TGGCGTCAAT 
GTCGGCTATC TGAAGCTGAC TCAATCCTCC ACCTGGAACC CCTTCTGA
 
Protein sequence
MRFSIIRDLF RTWIVTAGVV AASVVSQPAT AMAQGDQYTM QEVVDAGHSF FGSTSGALAK 
VIEKAFGQYG LPNGYILGQE GSGAFIAGLT YGEGTLYTKN AGQHPVFWQG PSLGIDYGGN 
GSRTMMLVYN LPAVGSLYSR FGGVSGSAYV VAGVGMTALK NNNMVLVPIR TGVGARLGVN 
VGYLKLTQSS TWNPF