Gene Avi_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3529 
Symbol 
ID7388796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2925484 
End bp2926134 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content58% 
IMG OID643652364 
Producthypothetical protein 
Protein accessionYP_002550547 
Protein GI222149590 
COG category[S] Function unknown 
COG ID[COG5385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAGA ACGTGAACCT AACGCTGGCC GGACCCGATC TGGCAGCCTT GCTGTGCAGC 
CGCGTCTGCC ATGATGTCAT TTCGCCGGTA GGCGCCATCA ATAACGGGCT GGAACTGCTG 
GATGAAGGCG GGGCGGATGC CGATGCCATG GACCTGATTC GCACCAGCGC GCTGAATGCT 
TCGGTTCGGT TGAAATTTGC CCGACTGGCA TTTGGGGCCT CGGGCTCGGT CGGAGCGTCG 
ATCGATACCG GCGAGGCCGA GAAAGCCGTC AAGGATTTCG CTGCCGCCGA AAAGAAAACC 
GAAATTACCT GGAACGGCCC GCGCGCCATT ATCGCCAAGA ACCGGGTCAA ACTGCTGATG 
AACCTGATGC TGGTGGCCTA CGGCGCCATT CCGCGCGGCG GCTCGCTGGA TGTGACGCTG 
GAAAATCCGG AATATGACGC GAAATTTACC ATCGTCGCCA AGGGCCGCAT GCTGCGTGTG 
CCGCCGAAAT TCGCCGAAAT CTGCAATGGC CAGATGGAAG AAGCTGTCGA TGCCCATTCT 
ATCCAGCCCT ATTACACCGT GTTGCTGGCC GACGAATCAT CGATGGAGCT GAAATACAGC 
ATCGGCGAAG GCGAAATTAC CTTCACCGCC GAATCAGTTG CTGCCGGCTG A
 
Protein sequence
MLKNVNLTLA GPDLAALLCS RVCHDVISPV GAINNGLELL DEGGADADAM DLIRTSALNA 
SVRLKFARLA FGASGSVGAS IDTGEAEKAV KDFAAAEKKT EITWNGPRAI IAKNRVKLLM 
NLMLVAYGAI PRGGSLDVTL ENPEYDAKFT IVAKGRMLRV PPKFAEICNG QMEEAVDAHS 
IQPYYTVLLA DESSMELKYS IGEGEITFTA ESVAAG