| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3527 |
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| Symbol | ctrA |
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| ID | 7388794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2923892 |
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| End bp | 2924593 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643652362 |
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| Product | two component response regulator |
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| Protein accession | YP_002550545 |
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| Protein GI | 222149588 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGGTTC TACTCATCGA AGACGACAGC GCCACAGCGC AGAGCATCGA ACTGATGCTC
AAGTCCGAAA GTTTTAACGT CTACACCACC GATCTCGGTG AGGAAGGCGT CGACCTCGGG
AAACTATACG ACTACGACAT CATCCTGCTG GACCTCAATC TTCCCGACAT GTCGGGTTAC
GAGGTTTTGA GAACGCTTCG CCTGTCCAAG GTCAAGACAC CTATCCTCAT CCTGTCCGGC
ATGGCCGGCA TTGAGGACAA GGTTCGCGGT CTCGGCTTCG GCGCTGACGA TTACATGACA
AAGCCGTTCC ACAAGGACGA GCTTGTTGCC CGCATCCATG CGATCGTTCG TCGTTCCAAG
GGCCATGCCC AGTCGATCAT CATCACCGGC GAACTGATCG TCAATCTCGA CGCCAAAACC
GTCGAAGTTG GTGGCCAGCG CGTTCACCTG ACCGGCAAGG AATACCAGAT GCTGGAGCTG
CTTTCGCTCC GCAAGGGTAC CACGCTGACC AAGGAAATGT TCCTTAACCA TCTCTATGGT
GGCATGGACG AGCCGGAACT GAAAATCATC GACGTGTTCA TCTGCAAGCT TCGCAAGAAG
CTGGCCAATG CCGCCGGTGG TGCAAACTAT ATCGAAACCG TCTGGGGCCG TGGCTATGTG
CTGCGCGAAC CTGACAGTGC CGAATATATG GAAACGGCCT GA
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| Protein sequence | MRVLLIEDDS ATAQSIELML KSESFNVYTT DLGEEGVDLG KLYDYDIILL DLNLPDMSGY
EVLRTLRLSK VKTPILILSG MAGIEDKVRG LGFGADDYMT KPFHKDELVA RIHAIVRRSK
GHAQSIIITG ELIVNLDAKT VEVGGQRVHL TGKEYQMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LANAAGGANY IETVWGRGYV LREPDSAEYM ETA
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