| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3526 |
|---|
| Symbol | |
|---|
| ID | 7388793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2923096 |
|---|
| End bp | 2923446 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643652361 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002550544 |
|---|
| Protein GI | 222149587 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGC GTGACAGCCT AGTTCGCCTG AAGGCATTTC AGGTTACCGA GAAGCGTCGG
CAGCTGCAAC AATTGCAGTT AATGATGTCT GAATTTGAAC GTATGGCCAA GGAACTGGAG
AATCAGATTT CTCTGGAAGA AAAAAAGGCG GGCATCACGG ATGCTTCGCA TTTCGCCTAT
CCGACTTTTG CAAAGGCCGC CCGCCAGCGT GCCGATAACC TGCAGGATTC GATTCGCGAG
CTGAAGGTTC AGCAAGATGC CGCGGAACTG TCACTGGAAC TGGCCGAGGC TGAACATGCC
AAGGCAGCTG CGTTGGAAGA GCGCGACAGT CAGCAGCGGG CTCGTGCTTA A
|
|---|
| Protein sequence | MKSRDSLVRL KAFQVTEKRR QLQQLQLMMS EFERMAKELE NQISLEEKKA GITDASHFAY
PTFAKAARQR ADNLQDSIRE LKVQQDAAEL SLELAEAEHA KAAALEERDS QQRARA
|
|---|
| |