| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3523 |
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| Symbol | |
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| ID | 7388791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2920837 |
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| End bp | 2921517 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652359 |
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| Product | exopolysaccharide production protein |
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| Protein accession | YP_002550542 |
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| Protein GI | 222149585 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.11703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTGTAC CGCATGCACA GCAAGGCCTT CAGGCACGTC GCATCAACCG ACGACGGACA
CGCCTTTCAA GACATCGGAT TCATCTGATT GCAAAACGAA GCCTCGACAT CCTGATCTCG
ATCAGTGCAT TGACGGTCTT GCTGCCGTTT CTCCTATCGG TCGCAGCACT GATCAAACTC
ACCTCCCCCG GCCCGGTCCT GTTTCGGCAG ATCCGCTGGG GCCGCGACCA GCAGAAAATC
CGCATCTACA AATTCCGCAC CATGTATGCT GCGGAATGTG ACGATAGCGG CGTGCGGCAA
ACCACCGAAA ACGACCCCCG TATCACTGTC GTCGGTGCGG TCCTGCGGCG CACCAATATC
GACGAACTTC CACAATTACT GAATGTGTTG AAGGGCGACA TGTCGCTGGT CGGGCCACGC
TGCCACGCGA TCGGCATGTT GGCCGCCGGC ATGCCCTACG AGGATCTGGT TAGCGACTAT
CATCACCGTC ATCAGGTCAA GCCCGGTCTG ACCGGCCTTG CCCAGATGCG TGGCCTGCGT
GGACCAACCG GTTCCGCCGC CAAAGCCCGC GCCCGGATCG CCGCCGATCT GTTTTATGTG
GATAATTTTT CGTTCTGGCT CGATATCAAG ATCATTCTCG GCACCATCCA TTCCGAACTG
ACTTGCGGCA AAGGCTTTTA A
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| Protein sequence | MGVPHAQQGL QARRINRRRT RLSRHRIHLI AKRSLDILIS ISALTVLLPF LLSVAALIKL
TSPGPVLFRQ IRWGRDQQKI RIYKFRTMYA AECDDSGVRQ TTENDPRITV VGAVLRRTNI
DELPQLLNVL KGDMSLVGPR CHAIGMLAAG MPYEDLVSDY HHRHQVKPGL TGLAQMRGLR
GPTGSAAKAR ARIAADLFYV DNFSFWLDIK IILGTIHSEL TCGKGF
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