| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3520 |
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| Symbol | pssB |
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| ID | 7388789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2918499 |
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| End bp | 2919281 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652357 |
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| Product | exopolysaccharide production protein PssB |
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| Protein accession | YP_002550540 |
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| Protein GI | 222149583 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
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| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTGATT TGTTTGAAAA GGCGGCAATA GCCGCTGGGC GCGATATTAT GGACGTGTTC
CACAATGGCC CAACGGTGCG CACCAAAAGC GATGCCTCTC CGGTGACCGA GGCCGATGAG
CGGGCGGAAG CGATCATTCT TGCCGCCCTG GCTGCGCAGT TTCCCGCTAT TCCCGTTGTG
GCCGAGGAAG CCGTTGCCGC TGGCAATATT CCTCAGACCA GGGGCCAGCC CTTCATTCTG
GTCGATCCGC TTGACGGCAC CAAGGAATTC ATTCGCAAAA GCTCCGATTT CACGGTCAAT
ATCGCGCTGA TCGAGGCCGG TGTTCCGGTC ATGGGCATCG TCTATGCTCC GGCGCGCGGC
CAAGCCTATA TTGGCGACCG TAATGGCGCC CTCAAGATCG AGATCGATGC CAATTTCCAA
CCGGTCTCGC GACAGTCCAT CACGGTCCGT ACTCCTTCGG GTACGTTGAT TGCAGTGGCC
AGCCGCGCGC ATAGCGGCCC GGAAACCGAG GAATTCCTGG TAACCCACGC CATAACAGAT
ACCCGTTCCG TCGGTTCCTC GCTAAAATTC TGCCTTGTGG CGGAAGGTGC GGCCGATGTC
TATCCACGCT TCGGCCGAAC GATGGAATGG GATACAGCCG CAGGCGACGC CGTGCTGCGG
GCCGCGGGTG GCATGACAGT CGGACCAGAC GGTGCACCGC TGCTCTACGG TAAACGCGAT
CAGCTGGATG ACAGCGACTT CGCCAATCCC TCCTTCATCG CCTGGGGTGA CAGACAGGCC
TGA
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| Protein sequence | MIDLFEKAAI AAGRDIMDVF HNGPTVRTKS DASPVTEADE RAEAIILAAL AAQFPAIPVV
AEEAVAAGNI PQTRGQPFIL VDPLDGTKEF IRKSSDFTVN IALIEAGVPV MGIVYAPARG
QAYIGDRNGA LKIEIDANFQ PVSRQSITVR TPSGTLIAVA SRAHSGPETE EFLVTHAITD
TRSVGSSLKF CLVAEGAADV YPRFGRTMEW DTAAGDAVLR AAGGMTVGPD GAPLLYGKRD
QLDDSDFANP SFIAWGDRQA
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