Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3518 |
Symbol | |
ID | 7388787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2916112 |
End bp | 2917317 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652355 |
Product | MFS permease |
Protein accession | YP_002550538 |
Protein GI | 222149581 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGAA AAACCCTCTT CCTAGCCATC TCGATCGGCA TGATCTGTGC CATCGGGCCG CTCGCAACAG ATATGTATCT GGGCGCCATG CCGCTGATGG CCACGAGCTT ATCGACCACG GCCGCGACGA TCCAGCTGTC CGTCATGACG TTCTTTTCCG GCTTCACCAT CGGGCAAATG TTCTACGGAC CGATTTCAGA CAGGACCGGC CGTAAGCCGA TAATTTATGT GGCATTGGCG ATCTTCTGCC TGTCCTCGTT CGGCTGCCTG ACCGCATCGA CCGGCGAGCA ATTGCTGGTA TGGCGCTTCA TGCAGGGCGT GGGCGGCTCG ATTGGCATGG TCATCGGAAC AGCCATCATC CGCGACACGC ATACCGGCCC GGCAGCCACA AAGCTGATGT CCATGGTGAT GCTGGTCATC GGCGTCGCCC CGATCCTCGC ACCCTTTGCT GGCAGCCTCA TTCTGAAAAT AGCCAATTGG CAGATGATTT TTGTATTGCT CGGCTGCTAT GCGGCGCTGT GCTTCGTGGT CGTTGCGCTC TGGCTTCCCG AAACCCGGTT GCCGGCCGAC CGCGCTTCCA GTAAGCCCAG CCGCGCCCTC ATCACCTATG GCGGCTTGCT GATCAGCCGC AATTTCATCC CCTATGCGGG CACCATGGCG CTCGTCCAGG GCGGATTCTT CGCCTATATC GCCGGGTCGT CTTTCATGCT GATGACGGTC TATGGGCTTT CGGCCATCAG TTACTCGATT ATCTTCAGCA CCAACGCAAT CGGCCTTGGT ATCGGCACGC AAATCTGCAA CCGGTTTGCC ACACGTTTTG GTGTCAAGGC CGCGGTACGC GGCTCCGTGC TGCTCTATAC GGTTATCGCC CTGATACTGG TCGCCACCCA GCTGACCGGC ACCGATAGCC TGACGGTCAC CTGCATTCTG ATGTTTATTC TCGTCATGTC CATCGGCGGC ATCATGCCGG GTTGCAACGT GCTGGCAATG GAAGCCCACG GCTCGATTGC CGGAACTGCC GCCGCCCTGG CGGGAGGCCT TTCCTTTGGT GCAGGCGCCC TGTCCAGTTT TGTCCTTGGA TTGCTGGAAA ACGGCACCGC CCTGCCTCTG GTCTGCGTCA TGGCCGGTTG CGGTATCCTG GCCGTACTTG TCACCCAGGT ATTTTTCGAG GATCGGCAAG AGACAACAGT TCCTGAAAAA GCCTGA
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Protein sequence | MNRKTLFLAI SIGMICAIGP LATDMYLGAM PLMATSLSTT AATIQLSVMT FFSGFTIGQM FYGPISDRTG RKPIIYVALA IFCLSSFGCL TASTGEQLLV WRFMQGVGGS IGMVIGTAII RDTHTGPAAT KLMSMVMLVI GVAPILAPFA GSLILKIANW QMIFVLLGCY AALCFVVVAL WLPETRLPAD RASSKPSRAL ITYGGLLISR NFIPYAGTMA LVQGGFFAYI AGSSFMLMTV YGLSAISYSI IFSTNAIGLG IGTQICNRFA TRFGVKAAVR GSVLLYTVIA LILVATQLTG TDSLTVTCIL MFILVMSIGG IMPGCNVLAM EAHGSIAGTA AALAGGLSFG AGALSSFVLG LLENGTALPL VCVMAGCGIL AVLVTQVFFE DRQETTVPEK A
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