Gene Avi_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3517 
Symbol 
ID7388786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2915168 
End bp2915794 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID643652354 
Producttranscriptional regulator protein 
Protein accessionYP_002550537 
Protein GI222149580 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.873146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAC AGCAGCGAAT GGTCATGCGT CTGCCGGTCA TGCCGGATGA GGAGCGGCGT 
GAGCGTATTC TCAAGGCTGC CGAAGTGGTG TTTGACACTA TGGGCTTTGG CGATGCGACC 
ATGGAGGAGG TGGCGCGTCT GGCTGGCATG GCGAAAAAGA CCGTCTACCG GTTCTTTCCC 
GATAAGCGCT GCTTGTTCAC GGCGCTGATC CAGTCTCATG ATCAGTTGCA GATCGAAATC 
GGCGGCCAGC GTGGGCAAAC GGCGGACCCG CGTGAGAGAG TGCGGCTGGC GCTCGAGGCT 
TTGGCGCGGT TCGTCCTGTC GCCACGCCAG ATTCTGGTGA CCCGGCTGAT CATTGCCGAA 
GCGGGCAAGC ATCCCGGCCT GACCCGGCAG TTTTACGAGG ATTGTGTCGA GAATTTTCGA 
GCCTTTCTGG CGCAGGAGCT AGATTTCCAC GTCGCGGGCA GCGCATGCGA GGCGGTTGAT 
CGCCGCGATA TTGCCGACAT CTTTGTCGGG GCGGTTCTGG GGCCGTTACA GACGAAGGTT 
CTGATGTTCG GCAAGCAGGC AGAGGATCTT GACAGCGAGA TCCGCATGCG TGTCGACCTG 
GCGCTGCGGC TGCTGATGCC TTCGTAA
 
Protein sequence
MSEQQRMVMR LPVMPDEERR ERILKAAEVV FDTMGFGDAT MEEVARLAGM AKKTVYRFFP 
DKRCLFTALI QSHDQLQIEI GGQRGQTADP RERVRLALEA LARFVLSPRQ ILVTRLIIAE 
AGKHPGLTRQ FYEDCVENFR AFLAQELDFH VAGSACEAVD RRDIADIFVG AVLGPLQTKV 
LMFGKQAEDL DSEIRMRVDL ALRLLMPS