| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3514 |
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| Symbol | |
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| ID | 7388784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2912607 |
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| End bp | 2913998 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652352 |
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| Product | ABC transporter membrane spanning protein (branched chain amino acid) |
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| Protein accession | YP_002550535 |
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| Protein GI | 222149578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATG TCGACATTTC CACCGTCAAG GCGCAGCCCG GCCTGATGGC GCGGGCATTG
AAAGAAGCCG TGTTCGCAGG CTTGCTGGCA CTCGGCCTGT TCGTACTGTT CATCGGAATC
AAGACCGACC AGGACATCAA CAATGCCCTG GTCTGGTATA CGCGCTGGGG TCTTCTATCT
ATTTTCGTGG CGATTGCTGC CATTGGCCGG TTTGCCGTGG TCGCTGTCTT GCGCCCCTGG
TCGGCGTCGC GCAAGGCGCG GGCGGCTGCA AAGCCCGCCG CTGCCACGGA TGCCCGACCG
TCTTTGTTCA AGACACATTT CCTGAAGATC GCGCTTGTGG CGCTGATCCT CTATCCGCCG
GTCATTCTCT TTCTGGTCGG TACGCAGGGT TCGCTGAAAT ATGTCGATAA TTTCGGCATC
CAGATCCTGA TCTACGTTAT GCTCGCCTGG GGATTGAACA TCGTCGTCGG CCTGGCCGGG
CTGCTCGATC TCGGCTATGT CGCCTTCTAT GCGGTCGGGG CCTATTCCTA CGCGCTGCTG
TCTCAGCATT TCGGTCTGTC CTTCTGGCTG TTGCTACCGA TATCAGGCAT TCTGGCCGCC
TTCTGGGGCA TCATGCTCGG CTTTCCGGTG CTACGTCTGC GGGGAGATTA CCTCGCCATT
GTTACGCTGG CCTTCGGGGA AATCATTCGG TTGGTGCTGA TCAACTGGAC GGATGTCACC
CAGGGCACGT TCGGTGTATC GGGCATTCCC AAGGCGACGC TGTTCGGCAT TCCCTTCGAT
GCCTCGGCGC ATGGCTTCGC CAAGACCTTC GGCCTGCCAA TGTCGTCAGC CTATTACAAG
ATCTTCCTGT TCTATCTGGC GCTGGGGCTG TGCATGCTCA CCGCCTATGT GACGATCCGG
CTGCGGCGTA TGCCGATTGG CCGGGCCTGG GAAGCGTTGC GCGAAGACGA GATCGCCTGC
CGGTCGCTTG GCATCGACAC GGTGAAGACC AAGCTGACGG CCTTTGCCAT CGGCGCGATG
TTTGGCGGTT TTGCGGGGTC GTTTTTTGCC GCCCGCCAGG GTTTCGTGTC GCCGGAAAGC
TTCGTCTTCC TGGAATCGGC GGTTATTCTC GCCATCGTGG TTCTGGGTGG CATGGGGTCT
CTGACCGGTA TCGCGGTTGC AGCCATCGTC ATGGTTGGTG GCACGGAACT GCTGCGCGAG
ATGGAATTCC TGAAGCACGT GTTCGGACCT GATTTTACTC CTGAACTGTA TCGCATGCTG
CTATTCGGTC TTGCCATGAT TGTGGTCATG CTGTTCAAGC CGCGGGGCTT TGTCGGCAGC
AGAGAGCCGA CGGCCTTCCT GAAGGAACGC AAGGCCGTCT CCGGCAGCTT TACCAAGGAG
GGTCACGGCT GA
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| Protein sequence | MANVDISTVK AQPGLMARAL KEAVFAGLLA LGLFVLFIGI KTDQDINNAL VWYTRWGLLS
IFVAIAAIGR FAVVAVLRPW SASRKARAAA KPAAATDARP SLFKTHFLKI ALVALILYPP
VILFLVGTQG SLKYVDNFGI QILIYVMLAW GLNIVVGLAG LLDLGYVAFY AVGAYSYALL
SQHFGLSFWL LLPISGILAA FWGIMLGFPV LRLRGDYLAI VTLAFGEIIR LVLINWTDVT
QGTFGVSGIP KATLFGIPFD ASAHGFAKTF GLPMSSAYYK IFLFYLALGL CMLTAYVTIR
LRRMPIGRAW EALREDEIAC RSLGIDTVKT KLTAFAIGAM FGGFAGSFFA ARQGFVSPES
FVFLESAVIL AIVVLGGMGS LTGIAVAAIV MVGGTELLRE MEFLKHVFGP DFTPELYRML
LFGLAMIVVM LFKPRGFVGS REPTAFLKER KAVSGSFTKE GHG
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