Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3507 |
Symbol | minD |
ID | 7388778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2907370 |
End bp | 2908185 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643652346 |
Product | cell division inhibitor |
Protein accession | YP_002550529 |
Protein GI | 222149572 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2894] Septum formation inhibitor-activating ATPase |
TIGRFAM ID | [TIGR01968] septum site-determining protein MinD |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00615597 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAAGG TCATCGTTGT GACATCAGGC AAGGGCGGCG TCGGCAAGAC GACCTCCACG GCTGCCCTTG GTGCGGCACT TGCCCAGCGC GGCGACAAGG TTGTCGTGAT CGATTTTGAT GTCGGTCTGC GCAATCTCGA TCTGGTCATG GGTGCCGAGC GCCGGGTGGT CTACGATCTC GTCAATGTCA TCCAGGGTGA TGCCAAGCTG CCGCAGGCGC TGATCCGCGA CAAGCGGGTC GATACGCTGT ACCTGCTGCC GGCCTCGCAG ACCCGCGACA AGGACAATCT GACGCCGGAA GGCGTGGAAT GGGTGATTAC CGAGCTGAAA AAGCATTTTG ACTGGGTGAT CTGCGATAGC CCGGCCGGGA TTGAGCGCGG TGCGACGCTG GCCATGCGCC ACGCCGATGT CGCTGTCGTC GTCACCAACC CCGAAGTGTC TTCGGTGCGC GATTCGGATC GGATCATCGG CCTGCTGGAT TCAAAGACCC TGAAGGCCGA GCGCGGCGAG CGGATGGAAA AGCACCTGCT GCTGACCCGC TACGATGCCG TTCGCGCCCA GCGTGGTGAT ATGCTCAAGG TCGAGGACGT CTTGGAAATC CTCTCCATCC CGCTGCTCGG CATTATCCCG GAAAGCATGG ACGTGCTGAA AGCCTCCAAT ATCGGTGCGC CGGTGACGCT GGCCGATGCC AAGAGCCTTC CTGCCCAGGC CTATTTCGAA GCTGCCCGCC GTCTGGCTGG TGAGGAAATT CCGGTTTCCA TGCCCGAGGA AAAGCGCGGC CTGTTCGGCA AGATTTTCGC ACGGAGGGCC GCATGA
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Protein sequence | MGKVIVVTSG KGGVGKTTST AALGAALAQR GDKVVVIDFD VGLRNLDLVM GAERRVVYDL VNVIQGDAKL PQALIRDKRV DTLYLLPASQ TRDKDNLTPE GVEWVITELK KHFDWVICDS PAGIERGATL AMRHADVAVV VTNPEVSSVR DSDRIIGLLD SKTLKAERGE RMEKHLLLTR YDAVRAQRGD MLKVEDVLEI LSIPLLGIIP ESMDVLKASN IGAPVTLADA KSLPAQAYFE AARRLAGEEI PVSMPEEKRG LFGKIFARRA A
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