Gene Avi_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3501 
Symbol 
ID7388772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2902709 
End bp2903242 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content61% 
IMG OID643652340 
Producthypothetical protein 
Protein accessionYP_002550523 
Protein GI222149566 
COG category[R] General function prediction only 
COG ID[COG3911] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.17987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGTT TCGTCATCCT CTCCGGTTGC TCTGGCGGCG GCAAGTCCAC TTTGCTCTCA 
GCCTTGGCTG CAAAAGGCTA TGCCACCATA GAAGAACCCG GTCGCCGCAT AGTGGCGGAA 
GAACAGGCCG GAGATGGCAA AGCGCTGCCC TGGATCGACC TGGCCGCCTT CGCCCACCGT 
GCCATTGCCA TGGCGCTGGA AGACCGGGAA CGAGCGGCAT CCCTCCCCGG CTGGGTGTTC 
TTCGACCGCA GCCTGATCGA CGCCGCCGCC GCGCTGAAAG CTGCGACCGG CGATGAGACA 
CAATTGAACG CGCTCAAGCA GCAGCACCGC TACCACGCCC GCGTTTTTCT CACCCCGCCT 
TGGCCGGAAA TTTACCAGCA AGACACTGAG CGGCAGCATG ATCTGGCCGC GGCAGAGGAA 
GAATATCAGC GCCTGCTCGA GGTCTATCCG GCGCTGGGAT ATGAGGTAAT CGTGTTGCCA 
AAGGTGAGCG TTGTGGAGCG CGTGGAATTT ATCCTGGCAA TGCTTGCGGG TTGA
 
Protein sequence
MNRFVILSGC SGGGKSTLLS ALAAKGYATI EEPGRRIVAE EQAGDGKALP WIDLAAFAHR 
AIAMALEDRE RAASLPGWVF FDRSLIDAAA ALKAATGDET QLNALKQQHR YHARVFLTPP 
WPEIYQQDTE RQHDLAAAEE EYQRLLEVYP ALGYEVIVLP KVSVVERVEF ILAMLAG