| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3494 |
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| Symbol | |
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| ID | 7388766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2891516 |
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| End bp | 2892805 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652334 |
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| Product | ABC transporter substrate binding protein (urea/amide) |
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| Protein accession | YP_002550517 |
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| Protein GI | 222149560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCA AGTCCAAACT GGCGAGCGCA CTTGTCGGCG CCATGCTGTC CACCACCGCC
TTCCACGGTG CGTTTGCCGC TGAAGATACG ATCAAGGTCG GCATTCTGCA TTCTCTCTCC
GGCACGATGG CGATTTCGGA AACGACGCTG AAGGACGCCA TGTTGATGCT CATCGACGAG
CAGAACAAGA AGGGTGGCGT TCTCGGCAAG AAGCTGGAGC CCGTCGTGGT CGATCCGGCC
TCCAACTGGC CGCTGTTTGC CGAAAAGGCC CGCGAGCTGA TTTCCAAGGA CAAGGTTGCC
GCCGTGTTCG GTTGCTGGAC CTCGGTGTCG CGCAAGTCGG TTCTGCCCGT CTTCAAGGAA
CTGGATTCGG TGCTGTTCTA CCCCGTGCAG TTCGAGGGTG AAGAAAGCGA ACGCAACGTC
TTCTACACCG GTGCCGCTCC CAACCAGCAG GCCATTCCCG CCGTCGATTA CCTGATGGAG
AACGAAGGCG TGCAGCGCTG GGTGCTCGAA GGCACCGACT ATGTCTATCC GCGCACGACC
AACAAGATTC TCGAAGCCTA TCTTCTGTCC AAGGGCGTGA AGAAGGAAGA CATCCTGGTC
AACTACACGC CGTTCGGCTT CTCCGACTGG CAGACCGAAG TCGCCGCCAT TAAGAAATTC
GGCTCGGCGG GCAAGAAGGC CGCTGTTATC TCCACCGTCA ATGGCGATGC CAACGTGCCT
TTCTACAAGG AACTCGGCAA CCAGGGCGTC AAGGCTGAAG ACATTCCGGT CATGGCCTTC
TCGGTCGGTG AAGAAGAGCT GGCTGGTATC GACACCAAGC CGCTGGTTGG CCATCTCGCC
GCCTGGAACT ACTTCCAGTC CGTCGATACC CCTGTGAATG CAGAGTTCAT CAAGACCTGG
CATGCCTTCA CCAAGAACGA CAAGCGCGTC ACCAACGACC CGATGGAAGC CGCCTATATC
GGCTTCAACA TGTGGGTGAA GGCCGTCGAA AAGGCAGGCT CGGCTGAACC CGACAAGGTC
ATCGATGCGC TGGTTGGCGT TTCCGTGCCG AACCTCACCG GCGGCTATGC CACGATGATG
CCAAGCCATT ACATCACCAA GCCGGTGCTG ATTGGCGAAG TCCAGGAAAA TGGCCAGTTC
GACATCGTCT CGCAAACACC GGAAGTGGTT GGCGACGAAT GGTCGGATTT CCTCCCCGAC
AGCAAGGACC TGATCGCCGA TTGGCGCCTG CCGATGAACT GCGGCAATTT CAACGTCAAG
TCCGGCAAGT GCGGCGGCAA GGGCTCCTAA
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| Protein sequence | MNFKSKLASA LVGAMLSTTA FHGAFAAEDT IKVGILHSLS GTMAISETTL KDAMLMLIDE
QNKKGGVLGK KLEPVVVDPA SNWPLFAEKA RELISKDKVA AVFGCWTSVS RKSVLPVFKE
LDSVLFYPVQ FEGEESERNV FYTGAAPNQQ AIPAVDYLME NEGVQRWVLE GTDYVYPRTT
NKILEAYLLS KGVKKEDILV NYTPFGFSDW QTEVAAIKKF GSAGKKAAVI STVNGDANVP
FYKELGNQGV KAEDIPVMAF SVGEEELAGI DTKPLVGHLA AWNYFQSVDT PVNAEFIKTW
HAFTKNDKRV TNDPMEAAYI GFNMWVKAVE KAGSAEPDKV IDALVGVSVP NLTGGYATMM
PSHYITKPVL IGEVQENGQF DIVSQTPEVV GDEWSDFLPD SKDLIADWRL PMNCGNFNVK
SGKCGGKGS
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