| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3491 |
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| Symbol | |
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| ID | 7388764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2888644 |
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| End bp | 2889804 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652332 |
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| Product | ABC transporter membrane spanning protein (urea/amide) |
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| Protein accession | YP_002550515 |
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| Protein GI | 222149558 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACGG CATTTCTTCT GCGCTCGCTG GACGCCAAGA TCCTCGTCGC CATCGCCATT
CTCATCGCGC TCGCCATTCT GGTGCCGATC CTCAGCCTTG CCACGTCGCC CGACAGCGCG
CTGCATATGC CGACCTATCT GGTGGCGCTG TTTGGCAAAT ACCTGACCTA TGCCATGCTG
GCCTTGGCGC TCGATCTGGT CTGGGGCTTT TGCGGCATTC TTTCGCTCGG TCACGGGGCG
TTCTTCGCGC TCGGCGGCTA TGCGATGGGC ATGTATTTGA TGCGCCAGAT CGGCCCGCGC
GGCACCTATG GCGATCCTGT CCTGCCCGAC TTCATGGTGT TTTTGAACTG GAAGGAACTG
CCCTGGTTCT GGCACGGCTT CGACATGTTC TGGTTTGCAG CCCTGATGGT GCTGGTGGCA
CCCGGTCTGC TGGCTTTCGT ATTCGGCTGG TTTGCGTTTC GCTCGCGGGT CAACGGCGTC
TATCTGTCAA TCATCACCCA GGCGATGACC TATGCGCTGC TGCTGGCCTT CTTCCGCAAC
GACATGGGTT TTGGCGGCAA TAACGGCCTC ACCGATTTCA AGGACATCCT CGGTTTCAAC
ATCCAGGCGG ATGGCACCCG TGCGGCGCTG TTTTCGCTCT CTGCGCTGTT TCTGGCGGGC
TCGCTGCTGC TGGTCTCGGC CATCGTTCGC TCCAAATACG GAAAGGTGCT GGTTGGCATC
CGCGATGCCG AAAGCCGCAC CCGCTTTCTG GGCTACCGGG TGGAAAACAT GAAGCTGTTT
GCCTTCGTGG TCTCGGCAAT GATGGCGGGC GTGGCGGGCG CGCTCTACGT GCCGCAGGTC
GGCATCATCA ATCCCGGCGA GTTTTCACCG GCCAATTCCA TTGAGGTGGT GATCTGGACC
GCCGTCGGTG GGCGCGCCAC GCTGATCGGC CCGATCATTG GCGCGGTGCT GGTCAATGGC
GGCAAGACGA TCTTTACCGG CCTGTTTCCC AATGCCTGGC TGTTTGCGCT GGGCGGGCTG
TTCGTGGCCG TCACACTGTT TCTGCCCAAG GGCATTGTCG GCACTGTCAC CCAAAGCCTA
CTCCGGCGCA GGCAGGACAA GGCTGCGGCG GAGGCCGAAG CGTCCAGAAC CTCTCATGGC
AACCCTCAGG CGGCGGAGTA A
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| Protein sequence | MITAFLLRSL DAKILVAIAI LIALAILVPI LSLATSPDSA LHMPTYLVAL FGKYLTYAML
ALALDLVWGF CGILSLGHGA FFALGGYAMG MYLMRQIGPR GTYGDPVLPD FMVFLNWKEL
PWFWHGFDMF WFAALMVLVA PGLLAFVFGW FAFRSRVNGV YLSIITQAMT YALLLAFFRN
DMGFGGNNGL TDFKDILGFN IQADGTRAAL FSLSALFLAG SLLLVSAIVR SKYGKVLVGI
RDAESRTRFL GYRVENMKLF AFVVSAMMAG VAGALYVPQV GIINPGEFSP ANSIEVVIWT
AVGGRATLIG PIIGAVLVNG GKTIFTGLFP NAWLFALGGL FVAVTLFLPK GIVGTVTQSL
LRRRQDKAAA EAEASRTSHG NPQAAE
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