| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3490 |
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| Symbol | |
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| ID | 7388763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2887885 |
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| End bp | 2888640 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652331 |
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| Product | ABC transporter nucleotide binding/ATPase protein (urea/amide) |
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| Protein accession | YP_002550514 |
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| Protein GI | 222149557 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGAAA AGACCACCAA CAGCCTCCTC TATCTCAACG GGGTCAGCGT CTCCTTCGAC
GGATTCCGGG CCTTGAACTC CCTGTCCTTC GTGGTCGAGC CGGGCGAGCT GCGCGCCATT
ATCGGCCCGA ATGGCGCGGG CAAGACGACG ATGATGGACA TCATCACCGG CAAGACACGG
CCTGACAGCG GCGAGGTGTT TTTCGACGGC GGCAAGGTGG ATCTCACCAA GCGTGACGAG
GCCGAAATCG CCCAGCTCGG CATTGGCCGC AAATTCCAGA AACCGACGGT GTTTGAAAGC
CATACGGTCT GGGACAATCT GGAACTGGCG CTGAACAAGC CGCGCGGGGT GTTTTCAACG
CTGTTTTACC GGCTGACGCC CAAGGACCGC GAGAGGATCG ACACCATTCT CGAAACCGTG
CGGCTCACCG CCCGCAAAAA CGACCTCGCC GCCAACCTGT CCCACGGCCA GAAGCAATGG
CTGGAAATTG GTATGTTGCT GGCGCAGGAG CCGAAACTGC TGCTGGTCGA TGAGCCGGTG
GCGGGCATGA CCGATGCCGA AACCGCCGAG ACCGCCATTC TGCTGCGCGA AATTTCCAAG
ACCCGCTCGG TCGTGGTGGT GGAACACGAC ATGGGCTTCA TCCGCGATCT CGGCGTCAAG
GTGACATGTC TGGCCGAAGG CTCGGTGCTG GCCGAAGGCT CGATCGATTT TGTTTCGAAC
GATCCGCGGG TGATCGAGAA TTATCTGGGG CGGTGA
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| Protein sequence | MSEKTTNSLL YLNGVSVSFD GFRALNSLSF VVEPGELRAI IGPNGAGKTT MMDIITGKTR
PDSGEVFFDG GKVDLTKRDE AEIAQLGIGR KFQKPTVFES HTVWDNLELA LNKPRGVFST
LFYRLTPKDR ERIDTILETV RLTARKNDLA ANLSHGQKQW LEIGMLLAQE PKLLLVDEPV
AGMTDAETAE TAILLREISK TRSVVVVEHD MGFIRDLGVK VTCLAEGSVL AEGSIDFVSN
DPRVIENYLG R
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