| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3489 |
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| Symbol | |
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| ID | 7388762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2887178 |
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| End bp | 2887873 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652330 |
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| Product | ABC transporter |
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| Protein accession | YP_002550513 |
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| Protein GI | 222149556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACAG TTGAAAATCT CAATCTTCAC TATGGTGCCG CCCAGGCGCT GCGCGGCGTG
AATATCACCG CGCCCATGGG CAAGATTACC TGCGTGCTGG GTCGCAACGG GGTGGGTAAA
AGCTCGCTTT TGCGCGCCGT GACCGGCCAG CATCCGGTGT CTGGAGGCAC GATTGCCTTT
GAAGGCACGG TGTTGAACGG CATGGCACCG TTCAATCGGG CGCGGCACGG TGTCGGTTAT
GTGCCGCAGG GGCGCGAGAT CTTTCCGCTG CTGTCGGTCA AGGAAAATCT GGAAACCGGC
TTTGCGCCGC TGAAGCGCAA GGACCGGACG ATCCCGGACG ATATTTTCGC GCTGTTTCCT
ATTTTGCAGA CCATGTTGTC GCGGCGCGGC GGCGACCTGT CGGGTGGCCA GCAGCAGCAG
TTGGCGATTG GCCGAGCCAT GGTAACCCGC CCGAAAATCC TGGTGCTGGA CGAGCCGACC
GAGGGCATCC AGCCATCGAT CATCAAGGAT ATCGGTCGGG CGATCCGCTA CTTGCGGGAT
TCAACCGGCA TGGCGATCCT GTTGGTCGAG CAATATCTCG ACTTCTGCCG GGAGCTTGCC
GACCATGTCT ACATCATGGA TCGCGGCGAA ATCGTCCATG AAGGCGGTGC AGAAACGCTG
GATACGGTCG AGGCTCGCCG CCACCTTACG GTATAA
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| Protein sequence | MLTVENLNLH YGAAQALRGV NITAPMGKIT CVLGRNGVGK SSLLRAVTGQ HPVSGGTIAF
EGTVLNGMAP FNRARHGVGY VPQGREIFPL LSVKENLETG FAPLKRKDRT IPDDIFALFP
ILQTMLSRRG GDLSGGQQQQ LAIGRAMVTR PKILVLDEPT EGIQPSIIKD IGRAIRYLRD
STGMAILLVE QYLDFCRELA DHVYIMDRGE IVHEGGAETL DTVEARRHLT V
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