| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3477 |
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| Symbol | ureC |
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| ID | 7387075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2879876 |
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| End bp | 2881588 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652321 |
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| Product | urease subunit alpha |
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| Protein accession | YP_002550504 |
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| Protein GI | 222149547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTA AAATGTCCCG CGCCGCCTAT GCCAGCATGT TCGGCCCCAC GACCGGGGAC
AAAGTGCGGC TGGCCGATAC CGAACTGTTC ATCGAGGTGG AAAAGGATTT CACCCATTAC
GGCGACGAAG TGAAATTCGG CGGCGGCAAG GTGATCCGCG ATGGCATGGG GCAAAGCCAG
GCGACGCGCG TGGACGGCGC GGTCGATACG GTCATAACCA ATGCGCTGAT CGTCGATCAC
TGGGGCATCG TCAAGGCCGA TATCGGCTTG AAGGATGGCC GGATCGTTGC CATCGGCAAG
GCGGGCAATC CCGATACCCA GCCGGGCGTC AATATCATTG TCGGCCCCGG CACGGAAGCG
ATTGCCGGGG AAGGCAAGAT CGTCACGGCG GGCGGCATGG ACAGCCATAT CCATTTCATT
TGCCCGCAGC AGATCGAGGA AGCGCTGATG AGCGGCTTGA CCTGCATGTT GGGCGGCGGC
ACCGGCCCTG CGCATGGCAC GCTCGCCACC ACCTGCACGC CTGGTCCCTG GCATATTGCC
CGGATGATCG AGGCGGCGGA TGCTTTCCCG ATGAACCTGG CTTTTGCGGG CAAGGGCAAC
GCCTCGTTGC CGGGTGCGTT GGAAGAAATG GTGCTGGGCG GTGCCTGCGC CCTGAAACTG
CATGAGGATT GGGGTACGAC CCCCGGTGCC GTCGATTGCT GCCTGTCGGT GGCCGACGAC
TACGATGTGC AGGTGATGAT CCATACCGAT ACGCTGAACG AAAGCGGTTT CGTGGAGGAT
TCCATCGGCG CCATCAAAGG CCGTACCATC CATGCCTTCC ATACCGAGGG GGCAGGCGGC
GGCCATGCGC CTGACATCAT CAAGATCTGC GGCCAGCCGA ATGTGATCCC GTCTTCCACC
AATCCGACGC GGCCCTATAC GATCAATACG CTGGCCGAGC ATCTCGACAT GCTGATGGTC
TGCCATCACT TGAGCCCATC GATCCCGGAA GATATTGCTT TTGCCGAAAG CCGGATCCGC
AAGGAAACCA TTGCGGCGGA AGACATTCTG CATGATATCG GCGCGTTTTC GATTATTTCG
TCGGACAGCC AGGCCATGGG CCGGGTCGGC GAAGTGGCGA TCCGTACCTG GCAGACGGCC
GACAAGATGA AGCGCCAGCG CGGACGGCTG CCATCGGAAA CCGGCGAGAA CGACAATATG
CGCGTCAAGC GCTATATTGC CAAATACACC ATCAACCCGG CCATTGCCCA TGGTCTCTCC
CATGAAATCG GCTCGATTGA AATCGGCAAG CGCGCCGATC TGGTGATCTG GAACCCGGCG
TTTTTCGGCG TCAAACCGGA TATGGTGCTG CTTGGAGGCT CGATTGCCGC CGCCCCGATG
GGTGATCCCA ACGCCTCGAT CCCGACGCCG CAGCCGGTGC ATTACCGGCA TATGTTCGGC
GCCTATGGCA AGGCCCGCAC CAACTCCTCC GTCACCTTCG TGTCTCAGGC CTCGTTGGAT
GTAGGTCTGG CGGCGCGGCT CGGCGTTTCC AAGCAATTGC TGGCGGTAAA AAACACCCGC
GGCGGCATTT CCAAGGCGTC GATGATCCAC AACAGCCTGA CACCGCATAT CGAGGTCGAC
CCTGAAACCT ATGAAGTGCG CGCTGATGGC GAATTGCTGA CCTGCGAACC GGCCACTGTT
TTGCCGATGG CACAGCGGTA TTTCTTGTTT TGA
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| Protein sequence | MPFKMSRAAY ASMFGPTTGD KVRLADTELF IEVEKDFTHY GDEVKFGGGK VIRDGMGQSQ
ATRVDGAVDT VITNALIVDH WGIVKADIGL KDGRIVAIGK AGNPDTQPGV NIIVGPGTEA
IAGEGKIVTA GGMDSHIHFI CPQQIEEALM SGLTCMLGGG TGPAHGTLAT TCTPGPWHIA
RMIEAADAFP MNLAFAGKGN ASLPGALEEM VLGGACALKL HEDWGTTPGA VDCCLSVADD
YDVQVMIHTD TLNESGFVED SIGAIKGRTI HAFHTEGAGG GHAPDIIKIC GQPNVIPSST
NPTRPYTINT LAEHLDMLMV CHHLSPSIPE DIAFAESRIR KETIAAEDIL HDIGAFSIIS
SDSQAMGRVG EVAIRTWQTA DKMKRQRGRL PSETGENDNM RVKRYIAKYT INPAIAHGLS
HEIGSIEIGK RADLVIWNPA FFGVKPDMVL LGGSIAAAPM GDPNASIPTP QPVHYRHMFG
AYGKARTNSS VTFVSQASLD VGLAARLGVS KQLLAVKNTR GGISKASMIH NSLTPHIEVD
PETYEVRADG ELLTCEPATV LPMAQRYFLF
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