Gene Avi_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3473 
Symbol 
ID7387072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2876651 
End bp2877190 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content54% 
IMG OID643652318 
Producthypothetical protein 
Protein accessionYP_002550501 
Protein GI222149544 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATTG GCAGAAAAGT GCCCAGCGTC ACGTTTCGTA CCCGCGTTCG CGATGAAGAG 
GTCGGTGGCC CAAACCCCTT CCGTTGGCAA GATATGACCT CGGATGATTA CTTCAAGGGC
AAGAAAGTCG TGCTCTTTTC GCTTCCGGGT GCTTTCACTC CCACCTGCTC GACCTTCCAA
CTGCCGGATT TCGAAAAGCT TTATAGCGAG TTCCAGTCTG CCGGCATTGA CGACATCTAC
TGCATTTCGG TCAATGATGC TTTCGTTATG AATGCCTGGG GCAAGCAGCA GGGCCTGGCC
AACGTCAAGC TCATTCCCGA TGGCTCCGGC GAGTTCACCC GCAAGATGGG CATGCTGGTG
TCCAAGGACA ATCTCGGCTT CGGCATGCGC TCCTGGCGCT ATGCGGCTAT CATCAACGAT
GGCGTGGTGG AGCAGTGGTT CGAAGAAGAA GGCTATTCCG ACAATTGCGA TAGCGACCCT
TATGGTGTGT CTTCGCCGCA GAATATCCTG GAAAAGCTGA AGGAAAAGCA GGCGGCCTAA
 
Protein sequence
MLIGRKVPSV TFRTRVRDEE VGGPNPFRWQ DMTSDDYFKG KKVVLFSLPG AFTPTCSTFQ 
LPDFEKLYSE FQSAGIDDIY CISVNDAFVM NAWGKQQGLA NVKLIPDGSG EFTRKMGMLV
SKDNLGFGMR SWRYAAIIND GVVEQWFEEE GYSDNCDSDP YGVSSPQNIL EKLKEKQAA