Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3473 |
Symbol | |
ID | 7387072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2876651 |
End bp | 2877190 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643652318 |
Product | hypothetical protein |
Protein accession | YP_002550501 |
Protein GI | 222149544 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATTG GCAGAAAAGT GCCCAGCGTC ACGTTTCGTA CCCGCGTTCG CGATGAAGAG GTCGGTGGCC CAAACCCCTT CCGTTGGCAA GATATGACCT CGGATGATTA CTTCAAGGGC AAGAAAGTCG TGCTCTTTTC GCTTCCGGGT GCTTTCACTC CCACCTGCTC GACCTTCCAA CTGCCGGATT TCGAAAAGCT TTATAGCGAG TTCCAGTCTG CCGGCATTGA CGACATCTAC TGCATTTCGG TCAATGATGC TTTCGTTATG AATGCCTGGG GCAAGCAGCA GGGCCTGGCC AACGTCAAGC TCATTCCCGA TGGCTCCGGC GAGTTCACCC GCAAGATGGG CATGCTGGTG TCCAAGGACA ATCTCGGCTT CGGCATGCGC TCCTGGCGCT ATGCGGCTAT CATCAACGAT GGCGTGGTGG AGCAGTGGTT CGAAGAAGAA GGCTATTCCG ACAATTGCGA TAGCGACCCT TATGGTGTGT CTTCGCCGCA GAATATCCTG GAAAAGCTGA AGGAAAAGCA GGCGGCCTAA
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Protein sequence | MLIGRKVPSV TFRTRVRDEE VGGPNPFRWQ DMTSDDYFKG KKVVLFSLPG AFTPTCSTFQ LPDFEKLYSE FQSAGIDDIY CISVNDAFVM NAWGKQQGLA NVKLIPDGSG EFTRKMGMLV SKDNLGFGMR SWRYAAIIND GVVEQWFEEE GYSDNCDSDP YGVSSPQNIL EKLKEKQAA
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