Gene Avi_3469 details

Gene Information

• Locus tag: Avi_3469
• Symbol: ureF
• ID: 7387069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2874136
• End bp: 2874828
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643652315
• Product: urease accessory protein
• Protein accession: YP_002550498
• Protein GI: 222149541
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0830] Urease accessory protein UreF

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATTG CTCTCGACAC GCTCGGCCTG ATCCGGCTGA TGACATGGCT CTCGCCGGCC 
TTTCCTGTGG GTGGCTTTGC CTATTCCGGT GGACTGGAAA AGGCGGTCGA GGATGGATTG 
ATTGATGGTG GCGGGACCGC GACCGGGCGG CAAGAGGCGT TGCTGGCCTG GCTGACATCG 
CTGCTGGACC ATGGCACAAT TTGGAACGAT GCGGTGCTTC TGGCTGAGGC CTGGCGGGTT 
TGGAATGTGC CGCAGTCCCT AACCGAGGTG TCGGATCTGG CGCTGGCGCT GGCCGGCTCT 
CGGGAGCGCT ATCAGGAAAC GACGGCGCTC GGCGCGGCGT TTCGTGAAGC GGCCCGCGCC 
TGGGCGGACC CGCTTTCGGC TCTGTCGCCC AATCCAGTCG CCTATCCGGT GGCGGTTGGG 
GCGGTCGGCG CCAGTCAGGG GATAGGTTGC GAGGCAGTGC TTGCCGCCTA TTTGCATGCG 
GCCCTGTCGC AGCAGGTCTC GGCGGGTATT CGCCTCAGCC TGATCGGCCA GACCGGTGGC 
CTCGCCATTC TGTCGCGGCT TGAGGCGCCT GTGGCAAGAT TGGCTGCCCG TGCCGTTCAG 
ACGGGGTTGG ACGATCTTGG CAGCGCGACG ATTGCCGCAG ACATCGTTTC GGCGCGCCAC 
GAAGGTCAAT CTGTGCGACT GTTCCGGTCG TGA 

 

Protein sequence

MTIALDTLGL IRLMTWLSPA FPVGGFAYSG GLEKAVEDGL IDGGGTATGR QEALLAWLTS 
LLDHGTIWND AVLLAEAWRV WNVPQSLTEV SDLALALAGS RERYQETTAL GAAFREAARA 
WADPLSALSP NPVAYPVAVG AVGASQGIGC EAVLAAYLHA ALSQQVSAGI RLSLIGQTGG 
LAILSRLEAP VARLAARAVQ TGLDDLGSAT IAADIVSARH EGQSVRLFRS