| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3464 |
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| Symbol | |
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| ID | 7387065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2868115 |
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| End bp | 2871420 |
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| Gene Length | 3306 bp |
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| Protein Length | 1101 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652311 |
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| Product | Acr family transporter |
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| Protein accession | YP_002550494 |
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| Protein GI | 222149537 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCT CCGCCTGGTC AATCCGCAAT CCGATAGCAC CCCTGTTGGG CTTCTTCCTG
CTGATGGTGC TGGGCATCCA GTCCTTCAAC AGCCTGCCCA TTACCCGCTT TCCGAATATC
GATGTGGCCG TCGTGTCGAT CAGCGTCACC CAGAGCGGGG CGTCGCCGTC GGAACTGGAA
ATGCAGGTGA CCAAGGAAAT CGAGGATGCG GTCGCCTCGA TCAACGGCGT CGATGAGATC
TCCTCCAAGG TCAATGACGG CGTGTCGGTC ACCTCGGTGG TGTTCCGCAT CGAAATTCCC
ACCCAGCAGG CCGTTCAGGA TGTCAAGGAT GCGGTGGATC GGATCCGCAA CGATCTGCCC
GCTGGCGTCG ATGAGCCGAT CGTCAACAAG GTCGATGTCG AAGGTCAGGC AATCCAGACC
TTTGCCGTCT CCGCCCCGAA CATGACGCTT GAAGAATTGT CCTGGTTCGT CGATGACACA
ATCAAACGCG CGCTGCAGGG CCAGAAAGGC ATTGGCCGCA TCGACCGGAT CGGCGGTGCC
GACCGCGAGA TCCGGATCGA GCTGGACCCG GATCGGCTGA ATGCACTGGG CATTACCGCC
GCCGACGTCA ACAAGCAATT GCGCGGCACC AATGTCGATA TCGGCTCGGG CCGGGGCCAG
GTGGCTGGCG CCGAACAGGC GATCCGCGTG CTGGGCGATA CCCGGAATGT CCAGGCGCTC
GCCACCACCA CCATTGCCAT TTCCTCGGAC CGCTTCGTCA AGCTTGCCGA TCTTGGCCGG
ATCATCGACA GCTATACGGA GCCAAAAAGT TTCGCCCTGT TCGACAACCA GCCGGTGGTG
TCCTTCTCGG TGTTCCGCTC CAAGGGTGCC TCCGATGTGG CCGTCGCCGA ACTGGTGGCC
AAAAGCCTCG ATGAGGTGCG GGCCAAAAAT CCTGATGTCG GCATCAACCT GATCAGCGAT
TTTGTCTATT TCACCTATGG CAATTACACC GCCGCCATCG ATACCCTGCT GGAAGGGGCA
ATCCTGGCGG TCATCGTGGT GTTCCTGTTC CTGAAAAACT GGCGAGCAAC GCTTATTTCG
GCCATTGCCC TGCCGCTTTC CGCCATACCG ACCTTCTGGA TCCTCGAGAT GATGGGCTTT
TCGCTCAATC TCGTCAGCTT CCTCGCCCTG ACACTGGCGA CCGGCATTCT GGTGGACGAC
GCCATCGTCG AAATCGAAAA CATCGCCCGC CATATCAAGA TGGGCAAGAC GCCCTATCGG
GCCGCTATCG AGGCTGCCGA CGAAATCGGC CTTGCCGTCA TCGCCACCAC CTTCACCATT
GTGGCCGTCT TCGTGCCCGT GTCCTTCATG GGCGGCATTC CCGGTCAGTA TTTCATCCAG
TTCGGCCTGA CGGTCGCCTT TTCCGTGCTG TTTTCGCTGC TGGTCGCCCG GCTGATCACC
CCGATGATGG CCGCATACCT GATGCGGCCG GAAGACGGCC ATGACGAGGA CGAAGGGCAG
GAAGGCCGTT TCATGCGGCT CTATACGCGG CTTGTCCTGA CGACCACCAG CACATGGTAT
CGCCGCTATC TGACACTGGC GGCAGCGCTG GTGTTCCTAG TGGTATCTGT CGGCCTGCTG
ATGCAGGTTC CGACCAGCTT CCTGCCGCCA GAAGATGCCG GGCGCATCAC GCTTTCAATA
GAACTGCCGC CCAATGCCAC GCTTGATGAA ACCGAAAGCC GGGCCAGGCA GATCACCGAG
ACCCTGAAGC CGCTTGCCGG CGTGCAATCG GTCTTTGTCC AGGGCGGCAC CTCGCCCAGT
GGCGATCTGG AACTGCGGCG GGCGTCCGTA ACCCTGCAAC TCTTCCGCAT CGAGCATTCG
CTGGTCAAAA CCGTGGTCAA CAAACTGATC GGCGGCCTGC CGCTGATCGG CCCTTACCTG
CCGAAAATGA CCGTCGACGG CCGCACGATC CCGCAATGGC AGATTGAAAA ACAGGTCTTT
GCCAAGCTGC ATGACATTCC CGATATGCGC GTCCAGAAAA TGAACGATCG CGGTGCCCGC
GACATGGCAT TCTACTTCCT CTCCAAGAAC GAAGAGGATC TGACAGAAGC AGTCAGCATT
CTGGAGGCGA AATTGCGCAC CGTACCGGTG CTGGCCAATG TCAGCGCCGA TGGCTCACTG
CCGCGCCCGG AATTGCAGAT CCGTCCGAAA ACCGATGAAA TGGCCAGATT GGGCATTACC
GCCCAGCAGG TTTCCGAAAC CCTTCGCGTC GCAACCATCG GCGATATCGA CGCGCAATTG
CCGAAAATCT CACTGGATGG CCGGTTGATC CCGATCCGGG TTCAAGCGGC GCTTGGCCAG
CGTCGCGACC TTGGTGCTAT CAGGGCGCTG AAAATCAAGT CTGCGTCCGG TTCCATGGTG
CCGCTCTCCA CCGTGGTCGA TATCGATTAC ACCCAAGGCA TCAGCTCGAT CAAACGCAAT
CACCGCGACC GTGTGGTCTC GATCGGCGCC GACCTGCCGC AGGGCGTGGC GCTCGATACG
GCGACGGCAG CCTTCAAGCA GGCCGTTGCC TCCGCCAAGA TTCCCGCCAG CGTCTATCTG
AAGGAAACCG GCGACACCAA GGTCCAGAAG GAAATGCTGG CGAGCTTCGT CAACGCGATG
ATCCTGGGCC TGCTGCTGGT GCTGATCGTG CTGATCCTGC TGTTCAAGGA CATCATCCAG
CCCTTCACTA TTCTGCTGTC GCTGCCGCTG GCTGTCGGTG GCGTGGCGGT GGCGCTGATC
ATCACCCATA ATGCCCTGTC GATGCCCGTG CTGATCGGCA TCCTGATGCT GATGGGAATC
GTTACCAAGA ATGCCATCCT GCTGATCGAT TTTGCCATCG AAATGCGCCG CCACGGCATG
GAACGTGTCG AAGCGATGGT CGAGGCGGGC CGCAAGCGCG CCAGACCGAT CATCATGACC
TCGATTGCCA TGTCGGCGGG CATGCTGCCC TCGGCGCTGG GCGTCGGCGA AGGCGGCTCG
TTCCGCTCGC CCATGGCCAT CGCCGTGATC GGCGGCATCA TCGTCTCGAC AGTAATGAGC
CTTGTCGTCG TCCCCTCCTT CTTCCTTGTC ATGGACGATC TGTCACGCCT GCTGGGCGTC
GTCTTCGGCA GGCTGGTCGG CGCCAAGGAA CAGGAACGAG AGCCGCTCGA CACCGCCACC
CTCACCGATT TACACGACCA GACCGCGGCC CAGATCTCCA CGCTCGAAGC CCGCATGGAT
GGCCTGGAAG CCGGTGCTGC CCATCCGCCA AGACGCCTCT CAGCGGGACC GTTCGGACGG
GATTGA
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| Protein sequence | MNFSAWSIRN PIAPLLGFFL LMVLGIQSFN SLPITRFPNI DVAVVSISVT QSGASPSELE
MQVTKEIEDA VASINGVDEI SSKVNDGVSV TSVVFRIEIP TQQAVQDVKD AVDRIRNDLP
AGVDEPIVNK VDVEGQAIQT FAVSAPNMTL EELSWFVDDT IKRALQGQKG IGRIDRIGGA
DREIRIELDP DRLNALGITA ADVNKQLRGT NVDIGSGRGQ VAGAEQAIRV LGDTRNVQAL
ATTTIAISSD RFVKLADLGR IIDSYTEPKS FALFDNQPVV SFSVFRSKGA SDVAVAELVA
KSLDEVRAKN PDVGINLISD FVYFTYGNYT AAIDTLLEGA ILAVIVVFLF LKNWRATLIS
AIALPLSAIP TFWILEMMGF SLNLVSFLAL TLATGILVDD AIVEIENIAR HIKMGKTPYR
AAIEAADEIG LAVIATTFTI VAVFVPVSFM GGIPGQYFIQ FGLTVAFSVL FSLLVARLIT
PMMAAYLMRP EDGHDEDEGQ EGRFMRLYTR LVLTTTSTWY RRYLTLAAAL VFLVVSVGLL
MQVPTSFLPP EDAGRITLSI ELPPNATLDE TESRARQITE TLKPLAGVQS VFVQGGTSPS
GDLELRRASV TLQLFRIEHS LVKTVVNKLI GGLPLIGPYL PKMTVDGRTI PQWQIEKQVF
AKLHDIPDMR VQKMNDRGAR DMAFYFLSKN EEDLTEAVSI LEAKLRTVPV LANVSADGSL
PRPELQIRPK TDEMARLGIT AQQVSETLRV ATIGDIDAQL PKISLDGRLI PIRVQAALGQ
RRDLGAIRAL KIKSASGSMV PLSTVVDIDY TQGISSIKRN HRDRVVSIGA DLPQGVALDT
ATAAFKQAVA SAKIPASVYL KETGDTKVQK EMLASFVNAM ILGLLLVLIV LILLFKDIIQ
PFTILLSLPL AVGGVAVALI ITHNALSMPV LIGILMLMGI VTKNAILLID FAIEMRRHGM
ERVEAMVEAG RKRARPIIMT SIAMSAGMLP SALGVGEGGS FRSPMAIAVI GGIIVSTVMS
LVVVPSFFLV MDDLSRLLGV VFGRLVGAKE QEREPLDTAT LTDLHDQTAA QISTLEARMD
GLEAGAAHPP RRLSAGPFGR D
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