| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3456 |
|---|
| Symbol | |
|---|
| ID | 7387058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 2860041 |
|---|
| End bp | 2860568 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643652304 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002550487 |
|---|
| Protein GI | 222149530 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2852] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGCCGTA ACCTTTGCAT TGCAAGACAG CAGCATATGA AGATGAACCG GCTGCGTCTT
GGTCTCTTCA CGCCTGCGGG GAGAAGGTGC CGGCAGGCGG ATGAGGGGGC CGAAGGCATG
ACGGACATTA CCAAACGCCG ACCCGGCAAA ACAGGACAAG CAAGACAGCT TCGTCAGAAT
GAAACCGATG CAGAATATCG ACTGTGGGGC GATCTTCGCA ACAGGCTGCT CAATGGTCAT
AAATTCGCGC GTCAGGTGCC TCTCGGTGCC TATATTGCTG ATTTCGTTTG CCGTGAACGC
TGCTTGATTG TTGAACTGGA TGGATGCCAA CATGCCGAAA GCGCTTCAGA CGAGATGCGA
ACAGCGTGGC TGAATGACCA GGGTTATGAT GTGCTTCGGT TTTGGAACGG CGAGGTTCTC
TCGGAAAGAC GCGATGTTCT TGAAACAATC CTTGCCGTTC TGGAAGGCAA GATCACCGAG
CGTTGTGGCA CATTACGGTT CTATCCGGGG AAACGAGGAC ATGAATGA
|
|---|
| Protein sequence | MCRNLCIARQ QHMKMNRLRL GLFTPAGRRC RQADEGAEGM TDITKRRPGK TGQARQLRQN
ETDAEYRLWG DLRNRLLNGH KFARQVPLGA YIADFVCRER CLIVELDGCQ HAESASDEMR
TAWLNDQGYD VLRFWNGEVL SERRDVLETI LAVLEGKITE RCGTLRFYPG KRGHE
|
|---|
| |