| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3440 |
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| Symbol | |
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| ID | 7387046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2846175 |
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| End bp | 2846741 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652292 |
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| Product | invertase/recombinase protein |
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| Protein accession | YP_002550475 |
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| Protein GI | 222149518 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.115695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTATTG GTTATGCTCG CGTTTCCACC AGTGATCAGA ATCTTGATCT TCAACTCCAG
GCGTTGGCGC AGGTGGGATG TGAGAGGATT TTTTCGGATC AGGGGCTCTC CGGCGCGACG
CGGCAAAGGC CGGGTTTGAT GGAGGCGCTT GCTGCACTCA AATCAGGCGA TACGCTGGTG
ATCTGGCGCC TTGACCGATT GGGGCGCTCT TTGTCGCATC TGATCGAGAT GGTCACGGAA
CTTGGAGAGC GGAAAATCGG CCTTTATTCC GTTAACGAAT GTATCGATAC GGCTTCGGCT
GGCGGCGTTC TGATTTTCCA CATCATGGGC GCCCTCGCAC AGTTCGAGCG CAGTTTGATT
TCCGAGCGGA CGCGGGCGGG CATGTCAGCC GCGCGGCAGC GCGGCAGCGC CATAGGGCGG
CCCGTCAAAC TGACGACGCA GGATGTGGAG GTGGCGCGTG GTGCCATTCA TGGTGGATCT
GTCACCGTCC AGGGAGCGGC CCGCGACATG GGCATCAGCC GCGCCACGCT CTATCGCGCA
CTTAGACGCA AGAGCGCCTT TCAGTGA
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| Protein sequence | MRIGYARVST SDQNLDLQLQ ALAQVGCERI FSDQGLSGAT RQRPGLMEAL AALKSGDTLV
IWRLDRLGRS LSHLIEMVTE LGERKIGLYS VNECIDTASA GGVLIFHIMG ALAQFERSLI
SERTRAGMSA ARQRGSAIGR PVKLTTQDVE VARGAIHGGS VTVQGAARDM GISRATLYRA
LRRKSAFQ
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