| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3433 |
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| Symbol | |
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| ID | 7387041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2840228 |
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| End bp | 2841121 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652287 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002550470 |
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| Protein GI | 222149513 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.955105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAGAA ACGCACAAGT GAACTGGGAT GATTATCGGT GCTTCCTGAC CCTCGCCAAA
ACGGGTAGCT TCTCACGGGC AGCACGCCTG CTTCACGTCG ATCACACTAC TGTCGGCCGG
AGGGTTGCGG CATTAGAGGT GGATCTCGGT ATAAAGCTGG TGGAGCGGCT GGCGAGAGAA
GTCCGGCTGA CGGCAGAGGG TCATGATCTG GCGACCCTGG GACTACCCGT CGAAGAAGCA
ATGGCCAGCG TCGAACGGGC GGCGGCAGGC GGCGGTGCAG CATTGGCGGG ACCTGTGCAT
ATTTCCGCGC CACCCGGGCT GGCATCGCTC TTGCTGGCAC CGAAACTGGT TTCCCTGCAT
CGCCAGTATC CCGAAATCAA AATCACGATG TCGAGTGACA AGGATTTTGC AAATCTCAAT
CGGCGCGAAG CGGATATTGC ACTACGATTG TCGCGCCCAC TCTCGAACGG ACTTGTCGCC
CGCAAACTCC GCGATATCCC ATTCTTCTTT TTCGCAAGCC ACACCTATGA CATCGCGGAG
GATGACTGGG AATTTATCAC CTATCTTCAG GCGGATGATA TTTTGCCGCA ACAGAGCTGG
TTGATGCAGC ATATCGGGTC GAGAACCATT GCGCTGCGAT GCAGTGATGC CGCGAGCCAG
GTTCAGGCCG CCGCCTCCGG CCTCGGCGTG GCACTGTTGC CGGACTATCT TGGATATAAT
GATACCCGTC TCAGGAAATG CCCCAGCCGG CTCACGCCGC CACGGCGCGA ATTATGGATG
GTGGTACATG ACGATATTCG CCACGCACCA CGGGTGCGGG TCGTGCTGGA TTTCCTGATC
GGCATACTCA CCGCCACGCA AGATCTCGAA TTGCCACATG CATCAGAGGC TTGA
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| Protein sequence | MWRNAQVNWD DYRCFLTLAK TGSFSRAARL LHVDHTTVGR RVAALEVDLG IKLVERLARE
VRLTAEGHDL ATLGLPVEEA MASVERAAAG GGAALAGPVH ISAPPGLASL LLAPKLVSLH
RQYPEIKITM SSDKDFANLN RREADIALRL SRPLSNGLVA RKLRDIPFFF FASHTYDIAE
DDWEFITYLQ ADDILPQQSW LMQHIGSRTI ALRCSDAASQ VQAAASGLGV ALLPDYLGYN
DTRLRKCPSR LTPPRRELWM VVHDDIRHAP RVRVVLDFLI GILTATQDLE LPHASEA
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