| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3428 |
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| Symbol | |
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| ID | 7387037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2836063 |
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| End bp | 2837385 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652282 |
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| Product | phage integrase protein |
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| Protein accession | YP_002550466 |
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| Protein GI | 222149509 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGTC ATAAATCAGC CTCTGACCGC ATTAAGCGGC GCGAAGGAAT CTTCTATTAT
GTGCGGCGCG TGCCAACGGC TTTGGCGCGA CTCGATCAAC GAGGCATTGT CCGCGTCAGC
TTGCGAACGG ATAGCTGGAC GGCAGCAGTC AATGCTGCAG TCGACGCGGA GCGAAATCTC
GAAGCGCTCT GGGCAGCGCT GGCAAAGGGT GAAAGCAAGT CTGCTTGGGA CCGTCACAAG
GCCGCCGTCA GTCGCGCCCA GTTGGAGGGC TACATCTATC GCTCGGCATC GGAGCTGCAC
GACGGGCCGC TGTTGGATCT GGTGCAACAA TCAAAAGCGG TTGTTGGTCG AGGGGCAGAC
AAAAGTGCTC GGCGCGCATT GCTTGGTGCA GAAGAGCCTC CTGCAGTCAC TCTGTCCGAT
CTCTTCATGG CTTATGAACA GGTTACTGTG CCTGGTCAGG TGCAGAAGCG AGAGGATCAA
AAGCGACGGT GGAAGGTGGC TCGCGAGCAG GCCTGGCGAG AGTTCGTTGA TTGTTTGGGA
AGCGAGGTAG AGTTTGCCAA TCTTACCCGT ATTCATTCCC GAAAATATCG AGATTGGCTT
GCTGCACGCG TTGTGGGCAG TCATATCTCG CCCGAGACGG CCAATAAGCA TATGATGCTC
GTCAGTAGTA TTATCTCGAC AATGGCGACG GAATACAACT TGGATCTTCC GTCGTTGTTT
TCCAAGTTGA AGCTGCAATC AATCCAGCGC CGCCGGCCAT CGTTCACGCG CGACCATGTC
GAGAATGTTC TGTTGCGGCC TGAGGCGCTC TGCGGTCTGA ATAAAACAGC GCGTATGGCA
GTCTATCTGG CCATTGAAAC GGGAATGGGC GCGGAGGAAC TGTGTGCTCT GCGTCCGGAA
GATATTCGTC TGGATGGTTC GGTGCCTCAT GTGCGCCTGA CACCACGCAC CGGGGCGACG
CTCAAGACGG AATTTCGCGA GAGAACAATT CCTTTGGTGG GCGTGTCGCT TTTGGCGGCA
AAACAGGTCC CGAACGGGCT GGAGAGGTAC TTTGATAAGG CGGCTTCGAT GTCGACCGCG
ATCAATAAGT ATCTGCGCAA GAACGGGCTT TTGCCGTCTG ACAAGCACAG CTTATACTCA
CTTAGGCACA GCTTCCAGGA TCGCCTGAAT GAGCAAAAAG CACCGGAGCG TATGCAGGCC
GATCTAATGG GGCATGCGTT CAGCCGTGAA ACTTATGGTG ACGGGCATCC CATCTCACAG
GTACAGGAAG TCCTCACGGC AATGGCTTAT CGGTTTGAGC CAGCCGCGAT TGATCTGGGT
TGA
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| Protein sequence | MARHKSASDR IKRREGIFYY VRRVPTALAR LDQRGIVRVS LRTDSWTAAV NAAVDAERNL
EALWAALAKG ESKSAWDRHK AAVSRAQLEG YIYRSASELH DGPLLDLVQQ SKAVVGRGAD
KSARRALLGA EEPPAVTLSD LFMAYEQVTV PGQVQKREDQ KRRWKVAREQ AWREFVDCLG
SEVEFANLTR IHSRKYRDWL AARVVGSHIS PETANKHMML VSSIISTMAT EYNLDLPSLF
SKLKLQSIQR RRPSFTRDHV ENVLLRPEAL CGLNKTARMA VYLAIETGMG AEELCALRPE
DIRLDGSVPH VRLTPRTGAT LKTEFRERTI PLVGVSLLAA KQVPNGLERY FDKAASMSTA
INKYLRKNGL LPSDKHSLYS LRHSFQDRLN EQKAPERMQA DLMGHAFSRE TYGDGHPISQ
VQEVLTAMAY RFEPAAIDLG
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