| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3415 |
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| Symbol | |
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| ID | 7387030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2828432 |
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| End bp | 2829349 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643652275 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002550459 |
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| Protein GI | 222149502 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTAT CGGTTTCTCT TGCCGCGCTC AGAACATTCG TCGAAGTAGC CCGCCTCCGG
AGCTTCAAGG ATGCGGCGCA AAGCTTGGGT GTGACCTCCG GAGCAGTAAG TCAGCAGGTC
AAGCTCGTTG AAAACAGATT GGATGTCACT CTATTCGAAC GGTCCGGCAG AAATGTTAAA
CTCACGGAGC AGGGCTTACG ATTGCTGGGG GCAATCCATG TACCTTTTGA ACAAATTCGC
GAGGCTGTTG AGGATTTTGA CAGACGCCGT TCAGCTCGTA ACGTCGTCCG AATTGTGACA
CCGATTGCCT TGGCTTCGCA TTGGTTGGTC CCGCGCATGG ATAGATTTTC GAGGCGGCAT
CCCGACATCG AACTACATAT CGACACCGCA CATGCGGAGG GTGTTCGCCG ACAGTTATTT
GATATCGCCA TCCAGTACGG CAACGAGACA GCTCCCGGCG TCGAGGCTAA ACGCTTGCCT
TCTTCGAAAT TAGTGGTCGT TGGAAGCCCG CAGCTTCTTG AAGGAGCTTC TCCTATCCGC
GATCCCAGTG ACTGTTTGAA ATTTCCACTG TTGCACGATC ACGATAGGCT TAACTGGCCT
GCTTGGTTTC GGGCGAATGG GTCCACGCAT CTGCCTGCTG CCTCAAGAAA AGGCCTTAGT
TTTGCGGATG AGTCGTTGTT AGTTGCAGCC GCGGCGGCTG CTCAGGGGTT AGCCTTGGTT
AGAGATATCC ACGCTGAAAA TCTGCTGTTA CACGGCCGCC TCAAAATAGC CATTGAAACA
TCCATGGAAC CGTTTCAATC ATATTATCTC TTGACCCCTT CATTGGTCAG CCAGCGACCC
GTTGTAGATG CGTGCAAGAA TTGGATACTA TCTGAGATGG CAAGGCCAGT ATTCCTCGAT
CTCCTATCGA GGCCATGA
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| Protein sequence | MMLSVSLAAL RTFVEVARLR SFKDAAQSLG VTSGAVSQQV KLVENRLDVT LFERSGRNVK
LTEQGLRLLG AIHVPFEQIR EAVEDFDRRR SARNVVRIVT PIALASHWLV PRMDRFSRRH
PDIELHIDTA HAEGVRRQLF DIAIQYGNET APGVEAKRLP SSKLVVVGSP QLLEGASPIR
DPSDCLKFPL LHDHDRLNWP AWFRANGSTH LPAASRKGLS FADESLLVAA AAAAQGLALV
RDIHAENLLL HGRLKIAIET SMEPFQSYYL LTPSLVSQRP VVDACKNWIL SEMARPVFLD
LLSRP
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