| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3411 |
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| Symbol | |
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| ID | 7387027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2825054 |
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| End bp | 2826250 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643652272 |
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| Product | gamma butyrobetaine hydroxylase protein |
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| Protein accession | YP_002550456 |
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| Protein GI | 222149499 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGA AACATGATGA TTATCTCAGC GTTGACGCCG GTAATGGCAT TACACGGCGG
TATCACTGGA TTTGGCTTCG TGACAAATGT CCGTGCAGCC AGTGCTTTAA CAAGAATAGC
CGCCAGAAAT ATTTCGACAG CAGCACAATT CCTATCGACA TTCGTCCCGT CGAGATCGGA
GAAGCTGGCA GTACCCTCAG GATAATATGG ATGGGAGGAC ACAAAAGCGA GTACGATTTA
TCGTGGCTCG CACGGCAAGA TTACTCTCAT CAAGTCCCAC CAAGGCCTGA AGGAGCAAAG
CCGGCATACG AACTCTGGGG TGGGATGGAG CTTCCTGCGG AGGCCCGCTT TAGCAGTTTG
CAGGCGCAAC ATGAAGATGA GACCCTGCGG GCAGCCTTGG ATGCACTTCT CCGTTTCGGA
GTGGTCACCT TTAAGGGAGA TCCGATTCGA AAGGTCTCCT TCGAAACCTT TACTGATCGT
GTTGCGGGCT TTCTCGACCG GACATATTTC GGTGAATTCT TCGATCTGAA TGTGAAACCG
GAAGCGACAA CAGATAGCGT GGCGTTCAGC ACAAGAGAGC TGCCGCTGCA TACGGATATT
CCCTATTACT CCCCACCACC AGATTTCCAG TTCCTTTATG GACTCGATGT AAGCCCGGAG
TGTGCAAGGC GCGGGATAGG AAGCACACGT TTCGTCGACG GCCTTGCCGC CGCCATCGGT
CTTCGGTCGG AAGAACCGGA GGCATTTGCA GCTCTTACAC GGATCGCCGT TATTAATCGG
GCTGAATATC CCCAGGCGAG CAAGATTTAC GAGAATATCG CGCCGATCAT AAAGCTTGCA
AAAGACGGTT CCATTGAGCG GCTTTTGAAC AACCCATCGA AGATGTTCTT CGACAACGTC
GAGTTCGACG ACATGTTGCC TCTCTACAGG GCTTACAAAA TCTTCAAGGA ACGACTGGTC
AGCGCTTCTC CGGCGTACTC ACATAACTGG TCCGACGGGG ACCTCGTAAT CTGGGACAAT
CGCCGCATCC TGCATGGTCG CGGAGAGTTT GGTAGTCAAG GTGTCAAGCG TATCTTAAGA
GGCGGCTACA TAAGCGAGAC CGAACTGCTC GCTCGCCGTC GTTTCCTGCG CGGCAACGGT
CCCGCTCATT ACTTTGCATC CGAGACAAGC CGTCCTCCCG CCTTAGCTGA GATGTGA
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| Protein sequence | MIEKHDDYLS VDAGNGITRR YHWIWLRDKC PCSQCFNKNS RQKYFDSSTI PIDIRPVEIG
EAGSTLRIIW MGGHKSEYDL SWLARQDYSH QVPPRPEGAK PAYELWGGME LPAEARFSSL
QAQHEDETLR AALDALLRFG VVTFKGDPIR KVSFETFTDR VAGFLDRTYF GEFFDLNVKP
EATTDSVAFS TRELPLHTDI PYYSPPPDFQ FLYGLDVSPE CARRGIGSTR FVDGLAAAIG
LRSEEPEAFA ALTRIAVINR AEYPQASKIY ENIAPIIKLA KDGSIERLLN NPSKMFFDNV
EFDDMLPLYR AYKIFKERLV SASPAYSHNW SDGDLVIWDN RRILHGRGEF GSQGVKRILR
GGYISETELL ARRRFLRGNG PAHYFASETS RPPALAEM
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