| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3409 |
|---|
| Symbol | |
|---|
| ID | 7387025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2822927 |
|---|
| End bp | 2823379 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643652270 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002550454 |
|---|
| Protein GI | 222149497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTCTC ACAGGATCGA TTTACCGCGT AAGGCGGCAG GCACCCGACA CTGGCCTGCG
GCGTTAAAAG AAGAGATTGT TCTGGCAACG CTTGAGGCTG GCGCGACGGT GGCATCGGTG
GCGCGGGGAT ACGATCTGGA CCCATCTCAG ATTTATCAGT GGCGCAAGGC TCTGAAGGTT
TCGCGGCTCT CATCTCAGGA GGTTGCAACG TCACCGGAAT TTCTGCCCGT GCAGATTTGG
GCAGCAGCTG ATGGTGAGCA AGCGTCGGTC CAGGAACATG CAGGCCAAGA ACAGGCGGAA
GCTCTGTCTT GCCCTGAGCG TGGGTCAGTG ACATCTTCGA TTTCGGGAGC GATCGAAATT
CAGGTTGGAC CGCTGCACCG GGTTCGGGTT TGCAATGATT TTGCCTCCGA CACGCTGGAG
CGCGTGCTTG ATGTTTTGCG GCGGCAACAA TGA
|
|---|
| Protein sequence | MSSHRIDLPR KAAGTRHWPA ALKEEIVLAT LEAGATVASV ARGYDLDPSQ IYQWRKALKV
SRLSSQEVAT SPEFLPVQIW AAADGEQASV QEHAGQEQAE ALSCPERGSV TSSISGAIEI
QVGPLHRVRV CNDFASDTLE RVLDVLRRQQ
|
|---|
| |