| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3402 |
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| Symbol | istB |
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| ID | 7387019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2815499 |
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| End bp | 2816293 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652263 |
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| Product | IS21 family transposase |
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| Protein accession | YP_002550447 |
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| Protein GI | 222149490 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1484] DNA replication protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCATG ATCCTGCCAG TGCTGCCGTC GTCATCATGC TGCGTAGTCT GAAGATGTAT
GGCATGGCCC AGGCCGTCAC GGACCTGATC GAGCAAGGTG CTCCGGCTTT CGACGCTGCC
GTGCCGATCC TGTCCCAGTT ACTGAAAGCC GAGGTGGCCG AGCGTGAGAT CCGCTCCATC
GCCTATCATA TGAAGGTCGC CCGCTTTCCT GCCTACAAGG ACCTCTCCGG CTTCGACTTC
GCCACCAGCG AAATCGTTGA GGCGACGGTG CGCCAACTGC ACCGATGCGA CTTCATGGAC
GGAGCACAGA ACATTGTCCT CGTTGGCGGG CCGGGCACAG GCAAAACACA CGTCGCGACC
GCGCTTGGTG TCCAGGCCAT CGAACATCAC CGCCGAAAGG TCCGCTTCTT CTCGACCATC
GAACTGGTCA ATGCGCTTGA GCAGGAGAAA GCAAAGGGCA AGGCAGGTCA GATCGCCGAG
ACCTTGGTTC GCCTCGATCT GCTGATCCTC GATGAACTCG GATACCTTCC GTTCAGCGCC
TCAGGTGGAG CGCTGCTGTT CCACCTGTTG AGCAAGCTTT ATGAGCGCAC CAGCGTCATC
ATCACCACCA ACCTCAGCTT CAGCGAATGG GCGACCGTCT TCGGCGACGC CAAAATGACG
ACCGCGTTGC TCGACCGCCT GACCCACCGT TGCCATATCC TGGAAACAGG AAACGACAGC
TTCCGCTTCA AGGCCAGTTC GGCCGCAGCA GCACAGAAGA GAGGAGAAAA GACCAGCACC
TTGACTAAAG CCTGA
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| Protein sequence | MRHDPASAAV VIMLRSLKMY GMAQAVTDLI EQGAPAFDAA VPILSQLLKA EVAEREIRSI
AYHMKVARFP AYKDLSGFDF ATSEIVEATV RQLHRCDFMD GAQNIVLVGG PGTGKTHVAT
ALGVQAIEHH RRKVRFFSTI ELVNALEQEK AKGKAGQIAE TLVRLDLLIL DELGYLPFSA
SGGALLFHLL SKLYERTSVI ITTNLSFSEW ATVFGDAKMT TALLDRLTHR CHILETGNDS
FRFKASSAAA AQKRGEKTST LTKA
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