| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3364 |
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| Symbol | |
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| ID | 7387510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2786442 |
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| End bp | 2788658 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652238 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550422 |
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| Protein GI | 222149465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.451115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTTCGA AAAAAGTTTC GGCGCCTGCC GAAGAAATCG TCAATCCCGG AAGCGTCAGC
CAGACTGTTT ATGATACGAT CATCATCGGC TCCGGCTTCG GCGGCAGCGT CGCCGCGCTC
AGGCTGTGCG AGGCCTTCCA GAACGTCAAT TATTCGGCTA CTGCAGGCAA GCCCGTGCTG
CTGCTGGAGC GCGGCAAGGA CTGGTGGGGC AATCTGACAG GCCAGCCCAC CAAAGCGCCG
CCGTTTAGCA ACTATCGCCA GCCGGATGGA CGCGCTGGCT GGATGATGGA TCTCGAGCCG
TTCGGCACGC CGCAATCTCC ACCGGATACC TATGGCCAGC CCGAGGAGTT GGATGGCGAG
ACGGCCAACT TCAATACGAT GACCACCTAT GCGCAGCGTC CGATCCCGGT CTATCCCGGC
CTGGTGGAAA TGATCGTTGC CTATCCGCCA CCGCCGCCGG AGCCGGTGCC GGATGCTCCC
GCCCCGACAC CAACCATGAC CACCATCGTT GGCGCGGCGC TCGGCGGCAC CTCGCATGTC
TACAATACCT TCTTCCAGAA GCCGTCTCAG CTGGCCTTCA CCCTGGCCTT CCGCGATCCC
GAGAAGTTGG ACTCCTACGA GAGTGTACTG CTGTCCTATG GCGAACTGGC GCAGCATTAC
GACACCGTCG AGAAAATGAT GGAGCCTAAA ACCATCGATG ACAAGGACAA CATGGTGACG
GAGACGGTGC CCGTCAGAGA GAAACCGGTC TTTACCTATG CGCTCAAGAG AAGCCCGCCC
TATCTTTCCA CTCGCAGCTT CAGGAAGCAG GTCAAGAAAA TCGAAGATGC TGTCCGGTTG
AGTAAAGTCG AAACGCCGAT TAAGTCGGTT CAACTGGAAT ATACCAAGCT GGCGCTCGAC
TGGAGCGTGG TGTGCAAGGA AGTGGAAGTC GAAATGCTGC CCTCCGCCAT CATCGGCGAA
ATGTGGTATG GGATGAACAG CTATTCGATC TCGAAGACGC CGTCGGAAGG CCAGGAATTG
CTCGGCGTCA AGAAGGCGCT GGACCAGAAT TACCTCAAGC AGGCCAAGGA CACCGGCCTG
CTTGACATTC GTTGCCTGAG CAATGTCACC AATGTCTATC AGGACCCGAA TTCCGATAAA
GACAGCCCAA TTTATGTCAT CAATGTCGAG CAGATCGCAC CGACCGATGT CGCCAATCCG
ACACTGCTGG TCTACCGGGC GAAGAACGTG ATCTTCTCCG CCGGCTCCAT GCATACGGCA
TCGATGCTGC TGGAATATTC CAACAATCCC AATCCAGAGG CACCTGACAC CAAAGGCCTG
CCAGCTCTGA GCAAATATGT TGGCAAGTTC TGGGGCCAGA ATGGCGATGT CACCGGCACT
CAGGACCTGA GCATCAAGAC GCGGCCTTCG GATGGCGGTC CCGGTTCGAC CGATGCCTCC
TTCTATTTCG TCAATGACGA CACCTTGAAT GGCATCACCC TTCCGGATGA CGAGTTGGAG
GCGGCCTTCA ATCAGTCGAT CGACTACATG AAGGTCAATA AATCGGCGTC TTTCATTCGC
CTCATGCTCT ATCCGGCCTG GTATGACGAA GCCGACAATC TGCAGAACAC CTATAATATG
TCGGTCTGCT ACCAGCCGGC GCCGGGCGAA TTCCTCGTGG ATCCGGCTTC GGACAAGTCT
TCGGGCCGCA AAGTCTACAG CCTGTATTAT CCCAATACGC CGACAGAGAA GGACGAGGGG
GCGGAGCCTA CCGAGGTTGG CGATATCAAT GTCGGCGTGC TGGATTCGGT CAATGCGCTC
ACCACGGTGC TGACCACATG GGGAGAAGTC AATGCCAGCA AGGAGGGCGA GAGCCTGACC
CGGCGCAATG GACCGCTCAC CTATCGTGGC CCGCTGCCAG CGCTGCAATC GACCCGGTTG
CATCACGCCC GAAGCCTGGA AGGCTGGGAC CCCAAACGCG TGCCGGAGGA ATTCGTGGTG
GCCTATGGCG TCACGGCCCA TCCGCTCGGG GGCTGCGTGC TGGGCAAGGC CTGCAACAAA
CACGGCCAGG TCTTGGCAGC CGACAACGAG ACGGCGGTGC CGGGCCTCTA TGTGGTTGAT
GGTTCTTTGA TCCCCGGTTC CACCGGTGCC GCGACCCCGG CATGGACCAT TGCCGCCGTG
GCCGAATATT GCATGACGAA AATCACCGGG AATATCGTCG GCACCACGCA GCAGTGA
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| Protein sequence | MSSKKVSAPA EEIVNPGSVS QTVYDTIIIG SGFGGSVAAL RLCEAFQNVN YSATAGKPVL
LLERGKDWWG NLTGQPTKAP PFSNYRQPDG RAGWMMDLEP FGTPQSPPDT YGQPEELDGE
TANFNTMTTY AQRPIPVYPG LVEMIVAYPP PPPEPVPDAP APTPTMTTIV GAALGGTSHV
YNTFFQKPSQ LAFTLAFRDP EKLDSYESVL LSYGELAQHY DTVEKMMEPK TIDDKDNMVT
ETVPVREKPV FTYALKRSPP YLSTRSFRKQ VKKIEDAVRL SKVETPIKSV QLEYTKLALD
WSVVCKEVEV EMLPSAIIGE MWYGMNSYSI SKTPSEGQEL LGVKKALDQN YLKQAKDTGL
LDIRCLSNVT NVYQDPNSDK DSPIYVINVE QIAPTDVANP TLLVYRAKNV IFSAGSMHTA
SMLLEYSNNP NPEAPDTKGL PALSKYVGKF WGQNGDVTGT QDLSIKTRPS DGGPGSTDAS
FYFVNDDTLN GITLPDDELE AAFNQSIDYM KVNKSASFIR LMLYPAWYDE ADNLQNTYNM
SVCYQPAPGE FLVDPASDKS SGRKVYSLYY PNTPTEKDEG AEPTEVGDIN VGVLDSVNAL
TTVLTTWGEV NASKEGESLT RRNGPLTYRG PLPALQSTRL HHARSLEGWD PKRVPEEFVV
AYGVTAHPLG GCVLGKACNK HGQVLAADNE TAVPGLYVVD GSLIPGSTGA ATPAWTIAAV
AEYCMTKITG NIVGTTQQ
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