| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3355 |
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| Symbol | |
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| ID | 7387503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2775817 |
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| End bp | 2776737 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652231 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550415 |
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| Protein GI | 222149458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGTG AAACCTATCC CCGCGATCTC ATCGGTTATG GTCGCCGCAC CCCCGATCCC
CGCTGGCCGG GAGAGGCGCG TGTGGCGGTG CAGTTCGTCA TCAATTATGA GGAGGGTGGG
GAGAGTTGCA TTCTCGACGG CGACCCGGCC TCCGAAAATC TGCTGTCGGA AATCGTTGGT
GCGGCGGCAT GGCCCGGCCA GCGCAACCTG AACATGGAAT CCATCTATGA ATATGGGTCG
CGTGCTGGTT TCTGGCGGTT GCACCGGATG TTTACGGCCC TCAATATACC GGTGACGGTG
TATGGCGTCA CGCTGGCCAT GGCCCGCAAC CCGGACGCGG TGGCGGCGAT GAAGGAGGCG
GGGTGGGAAA TCGCCAGCCA CGGCTATCGC TGGCTGGAAT ATAAGGATTT CCCCGAGGAG
ATTGAACGCC AGCACATTCT GGAAGCGGTG CGCCTGCATA CCGAGGTGGC GGGGGAGCGC
CCCTATGGCA TGTATCAGGG CAAGCCTTCC GACAACACGC TGCGGCTGGT GATGGAGGAG
GGCGGTTTTC TCTATTCCTC CGACAATTAT TCCGATGACC TGCCCTTCTG GGTGCCGGAT
CTTAACGGCA AACCGTTTCT GATCATTCCT TATACGCTGG AAACCAATGA CATGCGGTTC
GCCACGCCGC AGGGCTTCAA CTCCGGCGAC CAGTTTTTCA CCTATCTGAA GGATGCCTTC
GATACGCTCT ATCAGGAAGG CGCAGAGGGC GCGCCGAAAA TGATGTCCGT CGGCCTGCAT
TGCCGACTGG TTGGCCGTCC GGGCCGGGCG GCGGCGCTGA AGCGTTTTCT GGATTACGTG
CTGTCCCATG ACAAGGTCTG GACGCCGACC CGCCTTGATA TTGCCAAGCA CTGGCACGCC
CACCACAAGG CTGAATGGTA G
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| Protein sequence | MQSETYPRDL IGYGRRTPDP RWPGEARVAV QFVINYEEGG ESCILDGDPA SENLLSEIVG
AAAWPGQRNL NMESIYEYGS RAGFWRLHRM FTALNIPVTV YGVTLAMARN PDAVAAMKEA
GWEIASHGYR WLEYKDFPEE IERQHILEAV RLHTEVAGER PYGMYQGKPS DNTLRLVMEE
GGFLYSSDNY SDDLPFWVPD LNGKPFLIIP YTLETNDMRF ATPQGFNSGD QFFTYLKDAF
DTLYQEGAEG APKMMSVGLH CRLVGRPGRA AALKRFLDYV LSHDKVWTPT RLDIAKHWHA
HHKAEW
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