| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3342 |
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| Symbol | |
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| ID | 7387494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2763434 |
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| End bp | 2767438 |
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| Gene Length | 4005 bp |
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| Protein Length | 1334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652222 |
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| Product | peptide synthetase |
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| Protein accession | YP_002550406 |
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| Protein GI | 222149449 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTG TAGGCAGACA TGAGCAGGTT TTTCCGGTTT CTCTTGCGCA GGCAGGCTTG
TGGGTCAAAC AAAAGGTAGC TCCCGCCGAT CTGAGCTTTG TCCTTGCTGA ATCCATCGAA
ATTCACGGTC CCGTTCATCC AGGACTGTTC TGCCAGGCGT TGCGCCGCTT GTCAGATGAT
GTTGCTGTCA CACGGTCTCG CATCAAGGAA ATCGAAGGGC AGCCGCATCA GGTTGTCATG
GCGGCCTATT GCGGCGTCTT TGACGTGATC GATTTCAGCG GTGCTGACAA TCCTGGCGCA
AGCGCCATGG ACTGGATGCG CAAGCAGATG TCTAAGCCGC TCGATCTTGC CAATGACAAT
CTCTGGGGGT CTTCACTTTT GAAGCTCGGG GCCACAGAAT GGGTCTGGTA TCATTGGGCA
CATCATATCA TCATGGATGG GTTTTCTGGC GGCTTGCTGG CCCGGCGGCT GGCCGATATT
TATTCGGCGC TGGCCCAGGG CAACCAGCCG GAGCCCTATG ATTGCGGTTC TCCGCAGGAA
TTGCTGGAGC TTGAGCGCAC CTACCGCGAT TCGGTGCATT TCCAGCGCGA CAAGGCCTAT
TGGTCGGAGC AGATGAAGGG TCTGCCGGAG CCGGTGACCT TGATGAAGAA GAAAGGCGAG
CCATCCGGTG GCCTGCTGCG CCATACGACG GTCATCGATC GCCAGACGGT CAAGGCGCTT
GCTGAGATCA GCCGTGGCTT TGGCGCCAGC GTGCCACAGG CCTTGATTGC CCTGGTCGCG
GCCTATTACG CCAAGGCGAC CGACTGCGAA GAGCTGACCA TGGTCACCAT GGTGACGGCC
CGGATCAGCC AGACGATGCG CCGCATTCCG GGCATGACTG CCAATGCGGT TCCTCTGCGG
TTTTCGATCA CGCCTGACCT GTCCTGGCGC GAATTGACCG GTCAGGTTTC CCAGCAGATG
AGCCGGGCGC TGCGCTATCA GCGCTATCGC TATGAGGACA TTCGCCGCGA TCTCGGCATG
GTCCGCCAGG ATGCGCAGAT TGCCTGGCTG GGCGTCAATA TCGAGCCTTT CGACTACGAT
CTGCGCTTTG ATGGACAGCC AACCACCGTG CACAACCTTT CGAACGGCAC GATGACGGAT
TTCACCATCT TCGCCTATGA CCGTGGTGAC AATGGCGACC TGCGCATCGA TTTTGATGCC
AATCCGGCGC TCTATACGCT GGAAGAGCTT GCCGATCACG AGGCGCGGTT CACCCGCATG
TTGAGAGAGA TCCTCGTGAC GCCTGAACAG CCCCTGCGCG ATTTCAGCCT GCTGTCGAAG
TGGGAGCGGC AGGAAATTCT CACCGACTGG AACGATACGT CCCATAAACT GCCGGATCAG
ACCTGGCCGG AACTGTTCCG GGCGCAGGCG GCACGCACGC CGGATGCGGT AGCGCTATCC
TTTGGCGGTC GCCAGATGAC CTATGGTGAG CTGGATGCCG CCTCCGATCA TCTGGCTGGC
TATCTGATGG AAAAGGGCGC GGTACCCGGT TCTCTGGTGG CTGTGGCTGT GCCGCGGTCT
GAAAACATGG TTGTGGCGCT GCTGGCGGTG CTGAAAAGCG GTGCCGCCTA TCTGCCGCTT
GATCCGGCTG ATCCAGCCTC GCGGGTGGCG ATGATCCTGG AGGATGCGCA GCCAGCCTGC
GTTATCACCA CAGAGGAAGT GGCTGGCAAC CTGCCTGATG CCACCGACAA TCTGATCTTC
CTCGACAAGC CCCTCGAGCG ACAGGGACGC GATCTGCCGA AAGGGCCGTC GCTGAGCGAC
ACGGCCTATA TCATCTTCAC ATCCGGCTCG ACCGGTCGGC CCAAGGGCGT GGAAATTCCG
CATCGGGGCC TGATGAACTT CCTGTTGTCG ATGCAGGATC TGTTGAAACT GGACAGTGAA
GACCGTTTGC TGGCCGTGAC GACGATCTCC TTCGATATTG CAGCCCTTGA GCTTTATCTG
CCGTTGCTGG CAGGCGCGCG CACGGTGATC GCGCTCCGCT CGGAAGTGCG CGATCCGGCA
GTGCTGCATG GGTTGATCCG CAGTGCGGGT ATCACCATCA TGCAGGCGAC GCCGTCTTTG
TGGCGGTCCT TGCTGGCCGA TCATCATGAG GGACTGACGG GCTTGCGCAG CCTTGTCGGT
GGCGAGGCTC TGCCTGCCGA TCTCGCCCAC AAGATGGCAC GGCTCGGTCA TCCCGTTCTC
AATGTCTACG GACCGACGGA AACCACGATC TGGTCCACCA ACATGCCGCT TTTGGGCAGC
GATCTCGACA GTGCGCCAAT TGGCCGGCCA ATCTGGAACA CCCGCGTTTA TGTCCTCGAT
CGGCATTGCC AGCCAGTGCC GCCCGGCTTC ATCGGTGAGC TGTATATCGG TGGTGCGGGC
GTGGCGAAGG GCTACCTGAA CCGCCCGGAC CTGACGGCGG AAAAATTCAT GGCTGATCCT
TTCGCAGGCG AAGGCGAGCG GATCTACCGG ACCGGCGACC TGGTGCGCTG GCGGCGCGAT
GGCGTGCTGG ATTATCTCGG TCGCAACGAC CACCAGATCA AGATTCGCGG CTTCCGGGTG
GAGCCGGGCG AAATCGAGGC GGCGCTTTCC GCCCTGCCGC AGGTGCGTGA AGCGGTGGTT
ATTCTGCGCG ATGATCCGGG CCGCGAAAAG CGACTGGTTG CTTATGTTGT CCCCAGAGAG
GGTGCGGTAG GCGAGGGTGC CTCCTTGGAT GCTGCTGATC TTTCGGAGCG GCTAGGCAAG
GTTCTGCCCG TTCACATGAT CCCGGCAGCC TATGTGGTGC TGGACGCTAT TCCGTTGAAC
TCGAATGGCA AGACCGACCG GCACGCGCTG CCGGTACCGC AATGGACGGT AACGGAAGGC
ATAGCCCTGC CGGGGACCGA TGCTGAAAAG CGGCTTGCCG CCTTGTGGTG TGAGATCCTC
GGTCTGGAGC AGATCGGCAT TCACGACAGT TTCTTCGTGC TCGGCGGCGA TTCGCTGGCC
GCAGCCGGAA TGATTTCCGC CGTTCGCAGC CGGTTGAAAG GCGAAATTCC GCTTGGTGCG
GTGTTCGAAA CGCCCACCAT TGCCGCCTTG GCCGTGCATT TGGATGAGGC AAGTGCGGGT
TCACCGTTGA TCGAGCCGGT GCTGGCCATC CGCGCCAAGG GCGAGCGCCC GCCGCTGTTC
TGCATCCATC CGGTGCTGGG CCTGGGCTGG AGCTTCTTCT CGCTCGCACA ACATTTGAGC
GAGGATGTCC CGGTTTACGC CCTGCAATCG GACGGGTTGC ATGACCTCGC TGCCCTGCCG
CGCTCTATCG AGGACATGGC TGCGCTCTAC GTGCAGAGAA TTCGCAAGAT CCAGCCGCAG
GGGCCATATC ATCTGCTGGG CTGGTCATTG GGCGGGCTGA TTGCCCATGA AATGACCCGG
CAATTGCAGG CAGAGGGCCA GGCTATTGCG TTCCTGGGCA TGATGGACAG CTACCATTTC
AAGCCTGCGG CCCAATTGCA GGACGATGCG ACGCTGGCGC GGGCAGCTCT TGGGTTCCTC
GGCTTCGACG AAAAGGCGGC AGGCGACAAG CCATCGCTGG CCGAGCTTGG CGATTTCGTG
CTGAAAATGT TCGATACGGA CAACCATGTC CTGCTGGAGC AGGTTCACCA GTTCGATCCG
GATTTCGTCG AACGTGCCAA GGCGACCATC TTGCACAATC TGGAAATTGC CCAGCGCTTT
ACCCCGGGCA AGATCGATGC CGATGTGCAT TTCTTCCGCG CCGAACCAAG TGCGGGCAGC
GATGCGCTGA ACACCATCCT TAACTATGAT GCGGAAACCT GGTTGCCGCA TGTGGAGGGC
AGGGTTTACC TGCGCGACAT GACCTGCAAC CACCACGACA TGCTGAATAT CGAACCGGCA
TCCCATATCA GCGCCGTCGT TCAGGCAGAA CTGCTGCGTG AATTCCTGGT CCTGCGGCGG
CCACAGACTG AGGTCAAGAT TGAGCGTGTG TCGCGGTTTG CCTAA
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| Protein sequence | MSFVGRHEQV FPVSLAQAGL WVKQKVAPAD LSFVLAESIE IHGPVHPGLF CQALRRLSDD
VAVTRSRIKE IEGQPHQVVM AAYCGVFDVI DFSGADNPGA SAMDWMRKQM SKPLDLANDN
LWGSSLLKLG ATEWVWYHWA HHIIMDGFSG GLLARRLADI YSALAQGNQP EPYDCGSPQE
LLELERTYRD SVHFQRDKAY WSEQMKGLPE PVTLMKKKGE PSGGLLRHTT VIDRQTVKAL
AEISRGFGAS VPQALIALVA AYYAKATDCE ELTMVTMVTA RISQTMRRIP GMTANAVPLR
FSITPDLSWR ELTGQVSQQM SRALRYQRYR YEDIRRDLGM VRQDAQIAWL GVNIEPFDYD
LRFDGQPTTV HNLSNGTMTD FTIFAYDRGD NGDLRIDFDA NPALYTLEEL ADHEARFTRM
LREILVTPEQ PLRDFSLLSK WERQEILTDW NDTSHKLPDQ TWPELFRAQA ARTPDAVALS
FGGRQMTYGE LDAASDHLAG YLMEKGAVPG SLVAVAVPRS ENMVVALLAV LKSGAAYLPL
DPADPASRVA MILEDAQPAC VITTEEVAGN LPDATDNLIF LDKPLERQGR DLPKGPSLSD
TAYIIFTSGS TGRPKGVEIP HRGLMNFLLS MQDLLKLDSE DRLLAVTTIS FDIAALELYL
PLLAGARTVI ALRSEVRDPA VLHGLIRSAG ITIMQATPSL WRSLLADHHE GLTGLRSLVG
GEALPADLAH KMARLGHPVL NVYGPTETTI WSTNMPLLGS DLDSAPIGRP IWNTRVYVLD
RHCQPVPPGF IGELYIGGAG VAKGYLNRPD LTAEKFMADP FAGEGERIYR TGDLVRWRRD
GVLDYLGRND HQIKIRGFRV EPGEIEAALS ALPQVREAVV ILRDDPGREK RLVAYVVPRE
GAVGEGASLD AADLSERLGK VLPVHMIPAA YVVLDAIPLN SNGKTDRHAL PVPQWTVTEG
IALPGTDAEK RLAALWCEIL GLEQIGIHDS FFVLGGDSLA AAGMISAVRS RLKGEIPLGA
VFETPTIAAL AVHLDEASAG SPLIEPVLAI RAKGERPPLF CIHPVLGLGW SFFSLAQHLS
EDVPVYALQS DGLHDLAALP RSIEDMAALY VQRIRKIQPQ GPYHLLGWSL GGLIAHEMTR
QLQAEGQAIA FLGMMDSYHF KPAAQLQDDA TLARAALGFL GFDEKAAGDK PSLAELGDFV
LKMFDTDNHV LLEQVHQFDP DFVERAKATI LHNLEIAQRF TPGKIDADVH FFRAEPSAGS
DALNTILNYD AETWLPHVEG RVYLRDMTCN HHDMLNIEPA SHISAVVQAE LLREFLVLRR
PQTEVKIERV SRFA
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