| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3340 |
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| Symbol | pucM |
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| ID | 7387492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2762384 |
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| End bp | 2762740 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652220 |
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| Product | hydroxyisourate hydrolase |
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| Protein accession | YP_002550404 |
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| Protein GI | 222149447 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2351] Transthyretin-like protein |
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| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.555272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGGCC TGACCACCCA TGTTCTCGAT ACCGCCTTGG GCCGCCCGGC GTCCGGCCTG
CGCATCCAGT TGATGCGGAT GAACGGCGAG GAGGCGGACC TGATCAAGAC CGTGTTCACC
AATGCCGACG GCCGGGTGGA TGGTGGGCCA ATCCTGGCTG GCGAGGAATT TCGCATCGGT
CAGTACGAGC TGCTGTTTCA TGCCGGTGAC TATCTCAGGA GCCAGGGGGC GGAACTGACT
GATCCGCCGT TTCTGGATGT TATCCCCATT CGTTTCGGCA TTGCCGATCC GCAGGCGCAT
TACCATGTGC CGCTACTGCT TTCGCCCTAC GGCTATTCCA CCTATCGCGG GAGCTGA
|
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| Protein sequence | MTGLTTHVLD TALGRPASGL RIQLMRMNGE EADLIKTVFT NADGRVDGGP ILAGEEFRIG
QYELLFHAGD YLRSQGAELT DPPFLDVIPI RFGIADPQAH YHVPLLLSPY GYSTYRGS
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