| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3324 |
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| Symbol | |
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| ID | 7387479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2750125 |
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| End bp | 2751042 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652207 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002550391 |
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| Protein GI | 222149434 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.861783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGT CGAAACAGTT CCCCGTCAAT GCCCTGCGCG TGTTCGAGGC CGTCGCCCGC
CACAATGGCT TTACCCGCGC CGCCGAAGAA CTGGGCATGA CGCAGACGGC GGTGAGCTAC
CAGATCAAGT TGCTGGAGGA TAATCTCGGC ACGCTGCTGT TCCTACGAAC GTCAAGGCAA
ATCAGCCTGA CCGAGGCGGG GGAGCGGCTG CTGCCGAAAA CGCGGGAAGG CTTCGAGCTG
CTGCGCGAGG CCGTGGCACT GGCAAGGCAT GAGGCGAGCG AAGTTCTGGA AATTCACTCC
ACGCCAACCT TCGCCTCCCA TTGGCTGGCG CGCCATCTCG GCAGCTTTCA ACTCCAGCAT
CCGGGTATTG CCGTGCGCCT GCTGCGAAGC GATGAGAAGC AGCGGGATTT TGCCCGTGAC
GGCGGCGATG TCGGCATTCA TATCGGCAAG GAGCCGGTAG CCGGATTGAT CTGCCATCCG
ATTTTGAAGC TGGATTATGC CCCCATGCTC AGTCCGGCGC TGGCCGACAG CATTGGCGGC
ATCCGCGAAC CCGCAGATCT CCTCAAACTG CCGCGCGTGA GCAGTTGTGA GGATTGGTGG
GCGGACTGGT TTCACAGCGC TGGCATTGCA TCTCCCCTGC CAGCCTCTAT CGGCCTCGAC
GCGCAGGGCG CCCTCGACCT TCAAGCCGGT GCAGCTATGG CCGGACATGG CGTCGCCATT
CTCAGCCCCT TCTATGTCGA GGAAGAACTC GCATCCGGCC GCCTGATCCA GCCCTTCGAG
CTGCTGTTGG GGGATGAGCA GATCTACTGG CTGGTCTACC CGCCATCGCG CCGGACCATG
CCGAAGGTCA AAGCCTTTCA CCAATGGCTG ATCGCAAGCC TGCCGCCCTT CGAACGGAAC
GGTGTCCATA CGTCCTGA
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| Protein sequence | MKLSKQFPVN ALRVFEAVAR HNGFTRAAEE LGMTQTAVSY QIKLLEDNLG TLLFLRTSRQ
ISLTEAGERL LPKTREGFEL LREAVALARH EASEVLEIHS TPTFASHWLA RHLGSFQLQH
PGIAVRLLRS DEKQRDFARD GGDVGIHIGK EPVAGLICHP ILKLDYAPML SPALADSIGG
IREPADLLKL PRVSSCEDWW ADWFHSAGIA SPLPASIGLD AQGALDLQAG AAMAGHGVAI
LSPFYVEEEL ASGRLIQPFE LLLGDEQIYW LVYPPSRRTM PKVKAFHQWL IASLPPFERN
GVHTS
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