| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3322 |
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| Symbol | xdhC |
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| ID | 7387477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2747175 |
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| End bp | 2747978 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643652205 |
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| Product | xanthine dehydrogenase accessory protein XdhC |
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| Protein accession | YP_002550389 |
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| Protein GI | 222149432 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
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| TIGRFAM ID | [TIGR02964] xanthine dehydrogenase accessory protein XdhC |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGATC TTTCCGGCGC AGTGCTTGCC GCCTTCCTCG CGCGTCATGC AGACTGTGTG
GCGGTGACTG TCACCGAAGC CAAAGGCTCG ACCCCACGCG ACGTGGGTGC TCTGATGGTG
GTGGCGCGCG ACAGCGTATT CGGCACCATC GGCGGCGGGC AGCTGGAATA TCTGGCAATT
GAAAAAGCCC GCACCATGCT GGCAGGAGGC GAAGATGAAG CGGTGCTGAG CGTGCCGCTT
GGCCCGGAAA TCGGCCAATG CTGCGGTGGG CGGGTGACGC TGACGCTTGC CCTGATGACG
CCGGACCGCC AGCAGGCTCT ACTGGCTGGC GAGGATCAGG CACGCCGGGC CGGGCCCCAG
GTCTTCGTTT TTGGCGCAGG CCATGTTGGG TTGGCGCTGG CCGCCGCCTT GGCGCCGCTG
CCGTTTCGCA CCCGGCTGAT CGACGCACGC GACGCAATCG ATGGCGAGGT GCCAACCGGT
ATTCCGCTTG ACCGCACGGC CATGCCGGAA AGCCATGTGG CGCAAATCGC CCCTGGCGGT
GCTGTGGTCA TCGTCACCCA TGACCATGCG CTGGATTTCC TGATTGCCCG CGAAGCCTTG
GCCCGCGACG ATCTCGCCTA TATCGGCATG ATCGGCTCTG CCACCAAACG CGCCACGTTT
GCCCATTGGC TGGCGCGAGA AGGCGGTGAT CCGGCCAGCC TGGCGCGTCT GATTCTGCCA
ATCGGCGCAA GCACCATCAA GGACAAGCGC CCGCCTGTCA TCGCCGCGCT GGTCGCCGCC
GAACTGGTCA ACCGCCTGCT GTAA
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| Protein sequence | MTDLSGAVLA AFLARHADCV AVTVTEAKGS TPRDVGALMV VARDSVFGTI GGGQLEYLAI
EKARTMLAGG EDEAVLSVPL GPEIGQCCGG RVTLTLALMT PDRQQALLAG EDQARRAGPQ
VFVFGAGHVG LALAAALAPL PFRTRLIDAR DAIDGEVPTG IPLDRTAMPE SHVAQIAPGG
AVVIVTHDHA LDFLIAREAL ARDDLAYIGM IGSATKRATF AHWLAREGGD PASLARLILP
IGASTIKDKR PPVIAALVAA ELVNRLL
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