| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3310 |
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| Symbol | |
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| ID | 7387469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2736705 |
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| End bp | 2737910 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652197 |
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| Product | MFS permease |
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| Protein accession | YP_002550381 |
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| Protein GI | 222149424 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.641652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCA CGCCTTCCCG ACATCCCCAT CTTCCATTTA CCGCCCTTGC CGGTGCGCTG
GCCATGGCGG CGGCCATGGG CTTTGGCCGG TTTTCCTTCA CCCCCATTCT GCCGGGGATG
ATGACCGATC TTCATCTCGT CCCCGCCGAT GCTGGCCTGA TCGCGGCGGC GAATTTTCTC
GGCTACCTCC TAGGGGCCGT GCTTGCCGGC CAGGGTTGGG CGGCTGGGCG CGAAAGGTTG
ATTGCGCTGT CTTCGCTTTT GGCCACCAGC CTGCTTCTGG CCGCCATGGC GCTGACGCAG
CATGTCGGCT TGTTCATGGT CATCCGCTTT CTGTCAGGCG TGGCAAGTGC CTTCGCGATG
ATCTTCACGA GTTCGATTGT GCTTGCCCAT ATCAGCACCC ATGCCAGCGT CCATGGTCGA
GAATATGCGC AATCCACGCA TTTTGGCGGG GTAGGTATGG GGATCGCCGC GTCGTCCCTG
ATGGTCTATG CATTGCCGCA CCTGTTTGGG CCGCATCTGT TTGGCGCCTC CGCCGGGTGG
CGGCTGGACT GGCTGGCCGG GGCGGGACTG ACCTTTGTTG TCTTCCTTGT CGTCAGCCTG
CTTTTGCCAC GGGTGCGCAA AACTGAGGTG AGGGCCGAGC AGGAGCCGCC GCTTTCCTGG
GGCAGGCCAT TTCTTTTGTT GTTTGCCTCC TACGGCCTGT TCGGCTTCGG ATATGTGGTG
ACGGCGACGT TTATCGTCAC CATGGCCCGC ATGGCCAATG CGGGGCCGGT GGCGGAATTT
CTGGCGTGGT TTCTGGCGGG CATCATGGCG GCTGCCTCGC TGTTTGTCTG GCGTCCGGTG
CTGGACAGGC TTGGACTGGC AGGCGCCTAC AGCCTTGCCC TGCTTCTGGC AGCCATTGGG
GTTTTTGCCT CGGTTGGATT GCCGGGCATG GCTGCCCCGC TGGTGGGAGC GGCTCTTCTC
GGCTTAACCT TCATGACGAT TACCGCCTAT GGCCTGCGGC TGGCTAGAAC CCTTGCGCCA
GCCAGTCCCC GCAAGGCGCT GTCGATCATG ACGGCGGCCT TCGGCGTCGG GCAGACAATC
GGGCCGCTGG TCGCCGGCTG GCTTGCCGCC ATCAGCGGCA GTTTCGCGCT GCCAAGCCTT
GTTGCAGGCG CTGTATTGCT GGTCAGCCTC ATTCTGGCCG CAAGCCTGTG GAGAAAGACG
GTCTGA
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| Protein sequence | MTITPSRHPH LPFTALAGAL AMAAAMGFGR FSFTPILPGM MTDLHLVPAD AGLIAAANFL
GYLLGAVLAG QGWAAGRERL IALSSLLATS LLLAAMALTQ HVGLFMVIRF LSGVASAFAM
IFTSSIVLAH ISTHASVHGR EYAQSTHFGG VGMGIAASSL MVYALPHLFG PHLFGASAGW
RLDWLAGAGL TFVVFLVVSL LLPRVRKTEV RAEQEPPLSW GRPFLLLFAS YGLFGFGYVV
TATFIVTMAR MANAGPVAEF LAWFLAGIMA AASLFVWRPV LDRLGLAGAY SLALLLAAIG
VFASVGLPGM AAPLVGAALL GLTFMTITAY GLRLARTLAP ASPRKALSIM TAAFGVGQTI
GPLVAGWLAA ISGSFALPSL VAGAVLLVSL ILAASLWRKT V
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