Gene Avi_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3305 
Symbol 
ID7387466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2733311 
End bp2733916 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content57% 
IMG OID643652194 
Producthypothetical protein 
Protein accessionYP_002550378 
Protein GI222149421 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.129795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCTC ATTCGCGGGG ATTTTTTATG CTTATTCTTG TTCTCGGTCT GTTGTTTTTT 
ACATTGGTGC ATCTCACCCG GACGATTGCG CCGGGCTTTC GCGATTCCAT GGTGGCCCGC 
CTCAGCCTGA ACGGCTGGAA GTCGCTGTTT TCGGTGCTGT CCCTGCTGGG CATAGCCATT 
ATTGCCTATG GCTACAGTAT CGCGCCAATC GTCAATGTCT GGTTTCCACC GGCTGGCATG 
ACCCATCTGA CCTTGACCCT GATGGTCATC GCGATGATCT GTCTGGTGGC CAGCCTTCTC 
CCGGCTGGCC ATATCGCTGC AAAAACCAAG CATCCCATGG TTCTCTCTGT GAAAATCTGG 
GCGCTGGCGC ATCTGCTGTC GAATGGCGAC CTGCGCTCAA TCCTGCTGTT CGGCTGGTTG 
CTGGCCTGGG GCGTCATCCT GCGGATTTCG CTGAAGCGCC GGGAGCGGGC AGGCCTGCTG 
GTGCGCGCAC CGTTCGTGTC GGCCAAATAC GATGTCTATG CCGTGGTCAT CGGTCTGGTC 
GCTTACGTTG CTATCCTCCT CAAGCTGCAT GAGGTGCTGA TTGGCGTCTC GCCATTGCCG 
ATGTAA
 
Protein sequence
MLSHSRGFFM LILVLGLLFF TLVHLTRTIA PGFRDSMVAR LSLNGWKSLF SVLSLLGIAI 
IAYGYSIAPI VNVWFPPAGM THLTLTLMVI AMICLVASLL PAGHIAAKTK HPMVLSVKIW 
ALAHLLSNGD LRSILLFGWL LAWGVILRIS LKRRERAGLL VRAPFVSAKY DVYAVVIGLV 
AYVAILLKLH EVLIGVSPLP M