| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3300 |
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| Symbol | aglA |
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| ID | 7387462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2727767 |
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| End bp | 2729434 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652190 |
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| Product | alpha-glucosidase |
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| Protein accession | YP_002550374 |
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| Protein GI | 222149417 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACCA AAACTGATCG AGCCAGCAAA ACCGCAGTGA AAGCAGGGGG TGATTGGTGG
CGCGGCGCGG TTATTTATCA GGTCTATCCA CGCTCGTTTC AGGACACGAC AGGCGATGGC
ATCGGCGACA TCAAGGGCAT AACCCAGCGC TTGCCCTATA TCGCCTCGCT GGGTGTCGAT
GCCATCTGGC TGTCGCCGTT CTTCACCTCG CCCATGGCAG ACATGGGCTA TGACGTCTCT
GACTATTGCG ATGTCGATCC GATGTTCGGC ACACTTGCCG ATTTCGACGC GATGATGACC
AAGGCGCATG ATCTCGGCCT GAAAGTGATT ATCGACCAGG TAATTTCCCA TACGTCCGAC
CAGCACCCCT GGTTCATTGA GAGCCGCTCC AGCCGCAACA ATCCCAAAGC TGATTGGTAT
GTCTGGGCCA ATGCCAAGCC GGATGGCACC GCACCGAGCA ATTGGCTATC AGTGTTCGGC
GGCCCGGCCT GGGAATGGGA TGGGGTGCGC AAGCAATATT ACATGCATAA TTTCCTGGGC
TCGCAGCCCG ATTTGAATTT CCACAATCCG CAGGTGCAGC AGGCGGTGCT GGACGCCACC
CGTTTCTGGC TGGAGCGCGG CGTGGATGGT TTCCGGCTGG ATACCGTGAA CTATTATTTT
CATGACAAGG AATTGCGCAA CAACCCGCCA CATGCGCCAG ACAGCGGCGA TGCCGGGCTC
GATGCGCCGG ATGTCAATCC CTATGGTATG CAGGAGCATC TGCACGACAA AACCCAGCCG
GAAAACATCG GCTTTCTGCA AAAGCTTCGG GCGCTGCTGG ATGAATATCC AGACCGTGCT
ACGGTGGGCG AGGTCGGCGA TGGCGCGCGT TCGTTGAAAA CCGTGGCCGC CTATACCAGC
GGCGGCGACA AGCTGCATAT GTGCTACACA TTCGATCTGC TGGGGCCACA TTTCACGCCG
TCTCATATTC GTGATTGTGT CACCTCCTTC CAGTCCATGG TCAAAGACGG CTGGGTGTGT
TGGGCCTTTT CCAACCATGA CGTGATGCGT CATGTGTCGC GCTTTGCCCA GGGGCCGGAA
GAGATGCCGC AGGTGGCTAA GCTGGCGATC AGTATTCTCG CCAGCCTGCG CGGCTCGATC
TGCCTTTATC AGGGCGAGGA ACTCGGCCTG CCGGAGGCGG ATATCGCCTT TGAAGACCTG
CGCGATCCCT ATGGCATCCG TTTCTGGCCG TCTTTCAAGG GCCGCGACGG ATGCCGCACG
CCGATGGTCT GGGAAAAAGC CAAGGCTCAG GCCGGTTTTA CCAGTGGCAA ACCATGGCTG
CCGGTTCAGC CGGACCAGCA GGCTCTGTCG GTGGACGCCC AGGACAAGGA CAAAAGCTCG
GTGCTCAACC ATTACCGCAG CATGCTTGCC TTGCGCAAAG CCCATCCGGC CCTGCGCGAT
GGGTCAATGT CCTTCCTAGA TATCAACGAG GATGTGCTGG CCTTTTTGCG CGGGGAGAAC
AGCGAAAGAT TGCTGTTCGT CTTCAACATG CGGCGCGGAC CGCAGGAGGT TCGCCTGCCG
GAGCACATGA CGGTTAAGGA GATCATCGCT TTGCCAGATG CCCGCAGTAC GTTCGAAAAG
GGCGTGATTA CGCTCGATGC GCTGGACGGT TTTTGCGCGC GGGTGTGA
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| Protein sequence | MPTKTDRASK TAVKAGGDWW RGAVIYQVYP RSFQDTTGDG IGDIKGITQR LPYIASLGVD
AIWLSPFFTS PMADMGYDVS DYCDVDPMFG TLADFDAMMT KAHDLGLKVI IDQVISHTSD
QHPWFIESRS SRNNPKADWY VWANAKPDGT APSNWLSVFG GPAWEWDGVR KQYYMHNFLG
SQPDLNFHNP QVQQAVLDAT RFWLERGVDG FRLDTVNYYF HDKELRNNPP HAPDSGDAGL
DAPDVNPYGM QEHLHDKTQP ENIGFLQKLR ALLDEYPDRA TVGEVGDGAR SLKTVAAYTS
GGDKLHMCYT FDLLGPHFTP SHIRDCVTSF QSMVKDGWVC WAFSNHDVMR HVSRFAQGPE
EMPQVAKLAI SILASLRGSI CLYQGEELGL PEADIAFEDL RDPYGIRFWP SFKGRDGCRT
PMVWEKAKAQ AGFTSGKPWL PVQPDQQALS VDAQDKDKSS VLNHYRSMLA LRKAHPALRD
GSMSFLDINE DVLAFLRGEN SERLLFVFNM RRGPQEVRLP EHMTVKEIIA LPDARSTFEK
GVITLDALDG FCARV
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