| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3282 |
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| Symbol | |
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| ID | 7387448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2714173 |
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| End bp | 2715018 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652178 |
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| Product | ABC transporter membrane spanning protein (proline/glycine betaine) |
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| Protein accession | YP_002550362 |
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| Protein GI | 222149405 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTGGC TGACTGATTT CAAAATTCCC ATCGGCCCCA CCGCCAAAGT CGTTGTTGAC
TGGCTGACGG CCAACGGAGC CTGGTTTTTC GACTGGCTCT CCCACCTCAT TTCAAGCAGT
ATCGATGGCG TTCTGTTCGT GCTGCAATAT CCCAACCCGC TGGTGACAGC ACTTGCCATC
AGCATTATCG CCTGGCTGCT GCGCCGCTCC CTTCTCGTGG CGATCTTCAC CTTTCTCGGC
CTGGCGCTGA TCATCAACCA GGGCTATTTC AAGGAAACCA CCGAGACGCT GGCGCTGGTT
CTGGCCTCCA CCGCCGTCTG TATGCTGATC GGCGTGCCGC TCGGCATCCT GGCCGCGCGC
CGCGCATGGA TCTACGCCCT CATGCGCCCG GTCCTGGACC TGATGCAGAC CATCCCGACC
TTCGTCTATC TCATCCCGGC GCTGATCCTG TTCGGGCTCG GCATGGTGCC CGGTCTGATC
GCCACGGTGA TCTTTGCCGT CCCCTCACCC ATTCGTCTGA CCCGGCTCGG CATCGTCTCC
ACCCCTTCCT CCCTGGTGGA AGCTGCCGTT GCCTTCGGCG CCACGCCCAC CCAGGTGCTG
CGCAAGGTGG AATTGCCCTA TGCCCTGCCA CAGATCATGG CAGGACTGAC CCAGACCATC
ATGCTGTCGC TGTCCATGGT GGTGATTGCC GCGCTGGTCG GCGCTGCCGG TCTCGGCGTT
CCGGTGGTGC GGGCGCTGAA TACCGTCAAT ATCGCCAGGG GTTTCGAAGC CGGCCTTTGT
ATCGTCATCC TGGCAATCAT TCTGGATCGG ATGTTCCGCA TTCCATCGGC GGGAGATGAC
CAATGA
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| Protein sequence | MDWLTDFKIP IGPTAKVVVD WLTANGAWFF DWLSHLISSS IDGVLFVLQY PNPLVTALAI
SIIAWLLRRS LLVAIFTFLG LALIINQGYF KETTETLALV LASTAVCMLI GVPLGILAAR
RAWIYALMRP VLDLMQTIPT FVYLIPALIL FGLGMVPGLI ATVIFAVPSP IRLTRLGIVS
TPSSLVEAAV AFGATPTQVL RKVELPYALP QIMAGLTQTI MLSLSMVVIA ALVGAAGLGV
PVVRALNTVN IARGFEAGLC IVILAIILDR MFRIPSAGDD Q
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