| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3281 |
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| Symbol | |
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| ID | 7387447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2713065 |
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| End bp | 2714066 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652177 |
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| Product | ABC transporter substrate binding protein (proline/glycine betaine) |
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| Protein accession | YP_002550361 |
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| Protein GI | 222149404 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGAA CTAAAAAAGG AGCAGAATAT GCCGATTGCC AAGACACTGA AATTTGCACT
GCCGAAATAC GCTCTGGCCT TGGCCGGATG CGTCGCAGCA TTCAGCCCGG CTGCCTTTGC
GGCGGAAGCC GCCAGTTGCG GCACCGTTCG CATCTCGGAT GTCGGCTGGA CGGACTTGGC
CTCCACCAAT GCCTCCTTCG TCACCGTTCT GGAGGCATTG GGTTACAAGG CCGACGTCAA
GACGCTCGGC GTGCCCGTGA CCTATTCCTC AATGAAGAAC AAGGATATCG ACGTCTTCCT
TGGCAATTGG ATGCCAGCCC AGAAGGAAGC CATCCAGCAA TATATCTCGA TGACAAGTCG
ATCGACAGTG TCGCCGTCAA TCTCGAAGGC GCAAAATACA CGCTGGCCAC CAACGCCGCT
GGCGCCAAGC TCGGCATCAA GAGCTTCAAG GATGTCGCTG CTCACAAGGC CGAACTTGAT
GGCAAGATTT ACGGGATCGA GCCGGGCAAT GAAGGCAATG GCATGATCGT GTCGCTGATC
GAGGGCGACA AATTCGGCCT CAAGGGCTTT AACGTCGTGG AGTCCTCCGA ACAGGGCATG
TTGAGCCAGG TGACCCGCGC CGACAAGGAA AACAAGCCGG TGATCTTCCT GGCCTGGGCA
CCACATCCGA TGAACACCGC CCACCAGATC ACCTATCTCG CCGATGGCGA CGACACGGTG
TTCGGCCCCA ATTACGGTGG AGCGACAGTC TATACGGTGG CGCGCGGCGG CTATGCCAAG
GAATGTCCAA ATGTCGGCAA GCTGCTGACC AACATGAAGT TTTCGCTCGA CATGGAAAAT
GCCATCATGG GCAAGATCCT CGATGATGGC GAAGACGCCG ACAAGGCTGC CAAGACCTGG
CTGAAGGCCA ACCCAACCGT GATCGAGCCC TGGCTGGCTG GCGTCACCAC CAAGGATGGC
AAGGACGGCC TGGCGGCGGT CAAGACCAAG CTTGGCTTGT AA
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| Protein sequence | MTGTKKGAEY ADCQDTEICT AEIRSGLGRM RRSIQPGCLC GGSRQLRHRS HLGCRLDGLG
LHQCLLRHRS GGIGLQGRRQ DARRARDLFL NEEQGYRRLP WQLDASPEGS HPAIYLDDKS
IDSVAVNLEG AKYTLATNAA GAKLGIKSFK DVAAHKAELD GKIYGIEPGN EGNGMIVSLI
EGDKFGLKGF NVVESSEQGM LSQVTRADKE NKPVIFLAWA PHPMNTAHQI TYLADGDDTV
FGPNYGGATV YTVARGGYAK ECPNVGKLLT NMKFSLDMEN AIMGKILDDG EDADKAAKTW
LKANPTVIEP WLAGVTTKDG KDGLAAVKTK LGL
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