Gene Avi_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3243 
Symbol 
ID7388165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2681119 
End bp2682027 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID643652149 
Producthypothetical protein 
Protein accessionYP_002550333 
Protein GI222149376 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAC TCGCCCATAT ATCCGATATC CATCTGGGAC CTATGCCACA TCTCACCTTT 
CGAGAATTGG CATCGAAGCG CATCACAGGC TATGTCAACT GGCACCGCAA CCGGGCAAAA
CATATGGTCT CCGGCACGCT GGAGGCTTTG GTGGCCGATA TTCACGCCAA AGCCCCTGAC
CATCTGACCG TTACAGGCGA TCTCGTCAAT CTGGCATCCG GGCTGGAAAT CAACAAGGCC
GCCGAATGGC TGCGTACGGT CGGCCCACCG GCCACGACAT CGGTCGTGCC GGGCAATCAC
GATGCCTATG TGCCCGGCGC CCACGAAAAG GCAATGCATG CCTGGTATGA CTATGTGCGC
GGCGACACGG ACCCGGACAT CTGGCGCAAG GATTTCAAGC TCTGGCCGAC CTTTCGCCGC
CGGGGACCGG TCGGGCTGAT CGGTTGTTCC ACCTCCATCG CCACCCCGCC CTTTTCCGCC
AGTGGCTATT TCAGCTCGCG CCAGGCCCGT GAAACTGCCC AATTGCTGCG CCAAGCTGGC
GAAGAAGGCC TGTTCCGGGT GGTGCTGATC CATCATCCCC CTGTTCGGGG TGCCGCCTCG
CAGCACAAGC GGATGATCGG CATCCGCCGC TTTGCCGCAG CGATCTCGCT GGGCGGGGCC
GAACTGGTGC TGCATGGCCA TACCCATCTC AACACGCTGA ACTGGCTACA CAATCGCCAT
GGCCGCGTGC CGGTGGTGGG TATTGCCTCG GCCAGCCAGG GGCCGGGCAA CAAAAAGCCG
CAGGCTGCCT ATAACCTGTT TTCGATTTCC GGCGCATCAG GGGCGTGGGT GCTGGACTGG
GAACGCTATG CGCTGACGGG TGATACCAGC GAGGTATCCC TGACCCATAA CCAGAGATTG
TCGGGCTGA
 
Protein sequence
MFKLAHISDI HLGPMPHLTF RELASKRITG YVNWHRNRAK HMVSGTLEAL VADIHAKAPD 
HLTVTGDLVN LASGLEINKA AEWLRTVGPP ATTSVVPGNH DAYVPGAHEK AMHAWYDYVR
GDTDPDIWRK DFKLWPTFRR RGPVGLIGCS TSIATPPFSA SGYFSSRQAR ETAQLLRQAG
EEGLFRVVLI HHPPVRGAAS QHKRMIGIRR FAAAISLGGA ELVLHGHTHL NTLNWLHNRH
GRVPVVGIAS ASQGPGNKKP QAAYNLFSIS GASGAWVLDW ERYALTGDTS EVSLTHNQRL
SG