Gene Avi_3233 details

Gene Information

• Locus tag: Avi_3233
• ID: 7388157
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2674299
• End bp: 2676368
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643652141
• Product: hypothetical protein
• Protein accession: YP_002550325
• Protein GI: 222149368

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.569337
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTGT CCTTCTCCCC CTTCCTGCCT CTCTGGGCAC TGGCCGCGCT GGCCTTGCTG 
GCGCTGGCCG TCGCGGCTAT CGGCTTTCGC CGTGGCATAC GCGGGGCAAC GATCCGGCTG 
ATCGCCTTTG CCGCCTTGAT CGCCGCCCTC GCCAATCCGC AGCTTCTGTC TGAGAACCGC 
GACAAGCTCT CGACAGTGGT GCCTGTGATC GTTGACCGCA GCCAGAGCCA GACCGATATC 
GCCAGCCGCA AGGCGATGAC CGATCAGGCC CTGCAGGGCG TCAAGGATAA GCTGGCCCGC 
TTCCCCGGCA TAGAGCCGCG TATTGTCGAA GCCTCGACGC CGGAAAACGC CGACACGCCA 
TCGACCCGGC TGTTCGAAGC GCTATCCTCT GCAATATCCG ACGTGCCGCC AGCGCGGGTT 
GGTGCTGCGA TCTTCATCAC CGATGGACAA GTGCATGATG TGCCGTCCAA CCTGAAGACG 
CTCGGCATGG ATGCGCCGGT CCACACGCTG TTGACAGGCA AAGCCAATGA ATTCGACCGG 
CGCATCGAAG TGGTGCGCGC CCCCCGTTTT GGCATTGTCG GCCAGAACCA GGACATGTCG 
CTGCGGGTGA TCGATGAAGG GGTGAAGGGC AGCCAGCCCG CCACGGTGAC CGTGCGGATC 
AACGGCCAGG ATGGCGGTTC GTTTACCGCC GTGCCGGGTG CGGAAACGCC CTATTCCTTT 
GCCGTGCCAC GCGCCGGTAG AAATGTGCTG GAATTTTCCG TCTCAGGCCT GCCCGGCGAA 
GTGACGGAAA CCAACAACAA GACCGTGCAT CTGATCGACG GCATCCGCCA GAACCTGCGG 
GTGCTGCTGG TGTCAGGCGA ACCGCATGCT GGTGAGCGCG CCTGGCGCAA CCTGCTGAAA 
TCCGATGCCT CGGTGGATCT GGTGCATTTC ACCATTCTTC GGCCACCGGA AAAGCAGGAT 
GGCACGCCGA TCAACGAGTT GTCGCTGATC GCCTTTCCAA CCCGCGAGCT ATTTGTCGAA 
AAGATCAGTG ATTTCGACCT GATCATCTTC GACCGCTACC AGCATCGCGG TGTGCTGCCG 
ATCCTCTACT ATGATTATAT CGCCGAATAT GTCCGCAAGG GCGGCGCGCT GCTGATTGCG 
GCTGGCCCCG AACATGCCGG TCAGGATTCG ATTGCCATGA CCCCGCTGGC CTCGGTTCTG 
CCCGCAGCCC CAACCGGCAA TATGCAGGAG GGTGGCTTTT ATCCGCGCCT GTCGGAGATC 
GGCAAGAAAC ATCCCGTGAC CCGCGATCTC GATGGCGCCG CATCCGAGCC ACCGCATTGG 
GGCCGCTGGT TCCGCAGCGT CGATGTCGAT CCGCCGCAGG GTGAAACGGT CATGACCGCC 
AATGACAAGC CGCTGCTGGT GCTGAACCGC GCAGGCCAAG GCCGCGTCGC CATGCTATTG 
TCCGACCAGG GCTGGCTCTG GGCGCGCGGC TTTGAAGGTG GCGGCCCGCA TGTGGCGCTT 
TACCGCCGCA TCGCCCATTG GCTGATGAAG GAACCAGAAC TGGAGGAAGA AGCGCTGACG 
GCGCGGGCCA GTGGCCGGAT GCTGACCATT ACCCGCCAGA CCATCGGCAA TGACCCCGGC 
CCCGCCACCA TCACCAGCCC CTCCGGCAAG GTGCAGGACG TGACCTTGAC CCAGACCGAA 
CCGGGCCGCT TCACGGCGGA ACAACGGATG GCGGAAACCG GCCTGTTCAC CATCGCCAAT 
GGCGAATTTT CCACCCTCGT CCATATCGGC GCGGTGGATG CGCCGGAATT CAAGGCGATG 
ATCTCCACCC CTGACATCCT GAAACCGGTA TCAGACGCAA CCCACGGCCT GATCAAGCGG 
CTGGACAACG GGGCCAGCGG TGTATCCGTT CCCGACATCC TGCCCGTCAG CGGCCCGGTC 
CGCAGCAGCG ACGGCGAGCG CATGGCCATC CGTATGACCA GCGAAACCCT GCTGAAAGGC 
GTGGACACCC TGCCCTTGTT TGCCGGTTTC GGCGGATTGG CTCTGCTGCT GTTTGCGGTT 
TCGGCCATGT GGTGGCGCGA GGGACGGTGA 

 

Protein sequence

MSLSFSPFLP LWALAALALL ALAVAAIGFR RGIRGATIRL IAFAALIAAL ANPQLLSENR 
DKLSTVVPVI VDRSQSQTDI ASRKAMTDQA LQGVKDKLAR FPGIEPRIVE ASTPENADTP 
STRLFEALSS AISDVPPARV GAAIFITDGQ VHDVPSNLKT LGMDAPVHTL LTGKANEFDR 
RIEVVRAPRF GIVGQNQDMS LRVIDEGVKG SQPATVTVRI NGQDGGSFTA VPGAETPYSF 
AVPRAGRNVL EFSVSGLPGE VTETNNKTVH LIDGIRQNLR VLLVSGEPHA GERAWRNLLK 
SDASVDLVHF TILRPPEKQD GTPINELSLI AFPTRELFVE KISDFDLIIF DRYQHRGVLP 
ILYYDYIAEY VRKGGALLIA AGPEHAGQDS IAMTPLASVL PAAPTGNMQE GGFYPRLSEI 
GKKHPVTRDL DGAASEPPHW GRWFRSVDVD PPQGETVMTA NDKPLLVLNR AGQGRVAMLL 
SDQGWLWARG FEGGGPHVAL YRRIAHWLMK EPELEEEALT ARASGRMLTI TRQTIGNDPG 
PATITSPSGK VQDVTLTQTE PGRFTAEQRM AETGLFTIAN GEFSTLVHIG AVDAPEFKAM 
ISTPDILKPV SDATHGLIKR LDNGASGVSV PDILPVSGPV RSSDGERMAI RMTSETLLKG 
VDTLPLFAGF GGLALLLFAV SAMWWREGR